Mycolicibacterium smegmatis MC2 155: MSMEG_6079
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Entry
MSMEG_6079 CDS
T00434
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
msm
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_6079 (radA)
DNA repair and recombination proteins [BR:
msm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSMEG_6079 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_30
AAA
DUF7125
AAA_16
NACHT
Lon_C
Rad51
nSTAND3
AAA_19
AAA_24
AAA_29
RecA
AAA_22
RsgA_GTPase
NTPase_1
SLFN-g3_helicase
Glyco_hydro2_C5
MCM
PAXNEB
AAA_14
ABC_tran
AAA_5
ATPase_2
DUF7129
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABK69709
UniProt:
A0R563
LinkDB
All DBs
Position
6142417..6143817
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AA seq
466 aa
AA seq
DB search
MAGSKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSP
AVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHS
GKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT
MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV
DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG
TAVTVTLDGKRPMIGEVQALVSPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDL
YLSTVGGMRLTDPSADLAVALAIASAYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSE
AARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtggccggttcgaaaatacgttcgcagtaccgctgttcggagtgccagcacgtcgcgccc
aaatgggtcggccgctgcgccaactgtggtacctggggcaccgtcgacgaggtcgcggtg
ctcgccggcaacaacaagctcaacggtgcggcacggcgttcggtcgcccccacgtcaccg
gccgtgccgatcacgtccatcgatcccggcgtcacgcgccactaccccaccggcgtcagc
gaactcgaccgcgtgctcggcggtggtctggtcgcgggttcggtgacactgctcgcgggt
gatcccggggtcggcaagtccacgctgctgctcgaggtggccaaccgctgggcccacagc
ggcaaacgcgcgctctacctgtccggcgaggaatccgccgggcagatccgcctgcgggcc
gaacgcaccggatgcacgcacgatcaggtgtacctggccgccgaatccgatctgcagatc
gccctcggccacatcgacgaggtgaagcccagcctggtggtggtcgactcggtccagacc
atgtccaccaccgaggccgacggcgtgaccggaggcgtgacgcaggtgcgcgcggtcacc
acctcgctcaccgcgtacgccaaggccgcggtcggcgatccggccgtcgcgatgatcctc
gtcggccacgtcaccaaggacggcgccatcgcgggcccgcggtcactcgagcatctcgtc
gacgtggtgctgcacttcgaaggcgaccgggcatcgtcgctgcgcatggtgcgcggcgtg
aagaaccggttcggcgccgccgacgaggtcggctgttttcaattgcacgacaacgggatc
gagtgcgtcagcgatccttcgggactgttcctcgaccagcgtccgctcgcggtgcccggt
accgcggtgaccgtgaccctcgacggcaagcgccccatgatcggcgaggtccaggccctg
gtctccccgcctgcgggtccgccgcggcgcgcggtcagcggtatcgactcggcccgtgcc
gcgatgatcggcgcggtgttgcagacgcgctgccgcatgccgatcaacagcaacgatctc
tatctgtcgaccgtgggtggtatgcggctcaccgatccgtcggcagacctcgcggtggcg
ctcgcgatcgcatcggcgtacttcgacatcgcgatgcccatgaaggccatcgcgatcggc
gaagtgggcctggcaggtgacctgcgccgcgtcaccggcatggaccgcaggctgtcggag
gccgcccggttggggttcacgacagccgtcgtcccgccgggtgtcacgtcggcaccggcg
ggtctgaaggtcgtcgccgcggataacatccgggccgcggttcagacgatgcgggagatc
gcgattgcgggtgcccaatag
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