Mycolicibacterium smegmatis MC2 155: MSMEG_6157
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Entry
MSMEG_6157 CDS
T00434
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msm03032
]
MSMEG_6157 (topA)
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_6157 (topA)
Enzymes [BR:
msm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSMEG_6157 (topA)
DNA replication proteins [BR:
msm03032
]
Prokaryotic type
DNA Topoisomerases
MSMEG_6157 (topA)
DNA repair and recombination proteins [BR:
msm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSMEG_6157 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABK69586
UniProt:
A0R5D9
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(6226360..6229170)
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AA seq
936 aa
AA seq
DB search
MAGGDRGSGGTGNVRRLVIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRNAADVPAKF
KSEPWARLGVNVDQNFEPLYIVSPEKKSTVTELKGLLKDVDELYLATDGDREGEAIAWHL
LETLKPRVPVKRMVFHEITEPAIRNAAENPRDLDIALVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFHSASYWDVTAELDASVSDPSASPPKFTAKL
NTVDGRRVATGRDFDSLGQLKRPDEVLVLDEASAGALASGLRGAQLAVTSVEQKPYTRRP
YAPFMTSTLQQEAARKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSESAINAARTQAR
QLYGEEYVHPSPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSALDTDEFRLYELIWQR
TVASQMADARGTTLSLRIGGSASSGEQVVFNASGRTITFPGFLKAYVESIDELAGGESDD
AESRLPNLTQGQRVDAADLSADGHQTSPPARYTEASLIKALEELGIGRPSTYSSIIKTIQ
DRGYVQKKGSALVPSWVAFAVVGLLEQHFGRLVDYDFTAAMEDELDEIANGQEQRTNWLN
NFYFGGEHGVEGSIARAGGLKQLVGGNLEGIDAREVNSIKVFDDSEGRPVYVRVGRNGPY
LERMVDDPDNPGEQKPQRANLKEDLTPDELTPELAEKLFATPQEGRSLGIDPETGHEIVA
KDGRFGPYVTEVLPEPEDGGDDGTAGTPAKKGKKPTGPKPRTGSLFRSMDLETVTLEDAL
KLLSLPRVVGVDPTTNEEITAQNGRYGPYLKRGTDSRSLATEDQIFTITLDEALKIYAEP
KRRGRQAASAPPLRELGNDPVSGKPMVIKDGRFGPYVTDGETNASLRKGDDVLTITDERA
SELLADRRARGPVKKKAPAKKAAKKAPAKKAAAKKA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
ttggctggcggcgaccgcggcagcggtggaacaggtaatgtccggcgactcgtgattgtc
gagtcgccgacgaaggcgcgcaagatagctggctacctcggctcgaattacgtcgtggaa
tcgtcccgcggccacatccgtgacctgccccgcaacgccgccgacgtgccggcgaagttc
aagtccgagccgtgggcgcgccttggcgtcaacgtcgaccagaacttcgagccgctctac
atcgtcagcccggagaagaagtccacggtcaccgaactcaagggcctgctcaaggacgtc
gacgagctctacctcgccactgacggtgaccgcgagggtgaggccatcgcctggcacctg
ctggagacgctcaagccgcgcgtgccggtcaagcgcatggtgttccacgagatcaccgag
cccgcgatccgcaacgccgccgagaacccgcgtgacctggacatcgcgctggtcgacgcg
caggagacccgccgcatcctcgaccgtctgtacggctacgaggtcagccccgtgctgtgg
aagaaggtcgcgccgaagctgagcgcgggccgcgtgcagtcggtggccacgcgcatcatc
gtgcagcgcgaacgcgagcgcatggcgttccacagcgcgtcctactgggatgtgaccgcc
gagctggacgcgagcgtgtccgatccgtcggcgtcgccgccgaagttcaccgccaagctc
aacacggtcgacggccgccgcgtcgcgaccggccgcgatttcgactcgctgggccagctc
aagcggcccgacgaggtgctggtgctcgacgaggcgagcgcgggcgcgctggcctcgggg
ctgcgcggcgcgcagctggcggtcacctcggtcgagcagaagccctacacccgtcggccc
tatgcgccgttcatgacgtcgacgctgcagcaggaagcggcccgcaagctgcggttctcc
tccgagcgcaccatgagcatcgcgcagcggctgtacgagaacggctacatcacctacatg
cgtaccgactcgaccacgctgtcggagtcggccatcaacgccgcgcgtacacaggcccgt
cagctctacggcgaggagtacgtgcacccgtcgccgcggcagtacacccgcaaggtcaag
aacgcacaggaggcccacgaggccatccgccccgccggcgacgtgttccagacgccgggg
cagctgcacagcgcgctggacaccgacgagttccggctctacgagctgatctggcagcgc
accgtcgcctcgcagatggccgacgcgcgcggcaccacgctgagcctgcgcatcggcggc
tcagcgagttcgggtgagcaggtggtgttcaacgcctcgggccgcaccatcacgttcccg
ggcttcctcaaggcctacgtcgaaagcatcgacgaactcgccggcggcgagtccgacgac
gccgagagccgcctgcccaacctcacgcaggggcagcgcgtcgacgcggccgatctgagc
gccgacggccaccagaccagcccgcccgcccgctacaccgaggcctcgctcatcaaggcc
ctcgaagagctgggcatcggccgtccgtcgacctacagctcgatcatcaagaccatccag
gaccgcggctacgtccagaagaagggcagcgcgctggtgccgtcctgggtcgcgttcgcc
gtcgtcggcctcctcgagcagcatttcggccggttggtggactacgacttcaccgcggcc
atggaagacgaactcgacgagatcgccaacggccaggagcaacgcaccaactggctcaac
aacttctacttcggcggtgagcacggcgtcgagggttcgatcgcgcgcgccggaggactc
aagcagctcgtcggcggcaacctcgaaggcatcgacgcgcgagaagtcaactccatcaag
gttttcgacgactccgagggtcgtccggtgtacgtccgggtggggcgcaacgggccgtac
ctggagcgcatggtcgacgatcccgacaacccgggtgagcagaaaccgcagcgcgccaac
ctcaaagaggatctgacgcccgacgagctcacccctgagctcgccgaaaagctcttcgcc
acaccgcaagagggacgctcgctgggcatcgacccggagaccggccacgagatcgtcgcc
aaggacgggcgtttcgggccgtatgtcaccgaggtgctgcccgaacccgaagacggcggg
gacgacggtacggccggcaccccggcgaagaagggcaagaagccgaccggtcccaagccg
cgcacgggatcgctcttccggtccatggacctggagaccgtgacgctcgaagacgcgctc
aagctgctgtcgctgccgcgcgtcgtgggcgtcgacccgacgaccaacgaggagatcacc
gcgcagaacggccgctacgggccatacctcaagcgcggcaccgactctcgctcgctggcc
accgaggaccagatcttcaccatcaccctcgacgaggcactcaagatctacgccgagccg
aaacgccgtggccgccaggccgcgtcggctccgccgctgcgcgaactgggcaacgacccg
gtctcgggcaagccgatggtgatcaaggacggccggttcggcccgtacgtcaccgacggt
gagaccaacgcgagcctgcgtaagggcgacgatgtgctgaccatcaccgacgagcgtgcc
tccgaactgctggccgaccgccgtgcccgtggcccggtgaagaagaaggccccggcgaag
aaggctgccaagaaggcacccgccaagaaagccgccgccaagaaggcctag
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