Mycolicibacterium smegmatis INHR1: LI99_06130
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Entry
LI99_06130 CDS
T03409
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msn03032
]
LI99_06130
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_06130
Enzymes [BR:
msn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LI99_06130
DNA replication proteins [BR:
msn03032
]
Prokaryotic type
DNA Topoisomerases
LI99_06130
DNA repair and recombination proteins [BR:
msn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LI99_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AIU13101
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Position
1299279..1301198
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AA seq
639 aa
AA seq
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MSTTNYDAGSITILEGLDVVRKRPGMYIGSTSERGLHHMVWEVVDNGVDEAMAGHATRVD
VTLLADGGVQVCDDGRGIPVAMHETGIPTVDVVMTQLHAGGKFDSESYQVSGGLHGVGVS
VVNALSTRLEVDIHRDGYEWHQHYDHSVPATLTRGNPSGGTGTTVRFWADPDVFETTTYS
AETIARRLQEMAFLNKGLILTLTDQRDPEPQTRTFHHPGGLIDYVKHINRVKDPIQPSII
AFEGEGPGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRAALTSVVNRYAKDKK
LLKDKDPNLTGDDIREGLAAVISVKVAEPQFEGQTKTKLGNAAIRSFVQKVCHEQLTHWL
EANPVEAKVIITKVASSAQARIAARKARELVRRKSATDIGGLPGKLADCRSTDPSKSELY
VVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQSIITALGTGIHDE
FDISKLRYHKIVLMADADVDGQHISTLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRS
EPEFAYSDRERDGLLEAGRAAGKKINVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQV
TLDDAAAADELFSILMGDDVEARRGFITRNAKDIRFLDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccaactatgacgccggatccatcacgatcctcgaaggactcgacgtcgtc
cggaaacgcccgggcatgtacatcggctccaccagcgagcgcggcctgcaccacatggtg
tgggaggtcgtcgacaacggcgtcgacgaggccatggccggccacgcgacccgcgtcgat
gtcaccctgctcgccgacggcggcgtgcaggtgtgcgacgacggccgcggcatccccgtc
gcgatgcacgaaaccggcatccccacagtcgatgtggtgatgacccagctgcacgccggc
ggcaagttcgacagcgagtcctaccaggtgtcgggcggtctgcacggcgtcggggtctcc
gtcgtcaacgcgctgtctacccgcttggaggtcgacatccaccgcgacggctacgaatgg
caccagcactacgaccactccgtgcccgccaccctgacccgcggcaacccatccggcggc
accggcaccaccgttcggttctgggccgatcccgacgtgttcgagaccaccacctacagc
gccgagaccatcgcgcggcgcctgcaggagatggcgttcctcaacaagggcctgatcctc
acgctcaccgatcaacgcgaccccgaaccgcagacgcggacgttccaccaccccggcgga
ttgatcgactatgtcaagcacatcaaccgggtcaaagacccgatccagcccagcatcatc
gcgttcgagggggaggggccggggcacgaggtcgagatcgcgatgcagtggaacgcgggg
tattcggagtcggtgcacaccttcgccaacaccatcaacacgcatgagggtgggacgcac
gaggagggtttccgtgcggcgctgaccagcgtggtgaaccggtatgccaaggacaagaag
ctgctcaaggacaaggatcccaacctcaccggtgatgacatccgtgagggtttggccgcc
gtgatctcggtgaaggtggccgaaccgcagttcgagggccagacgaaaaccaagctgggt
aacgcggcgatccgctcgtttgtgcagaaggtgtgccacgaacagctgacccactggctc
gaagcgaatcccgttgaggccaaggtgatcatcaccaaggtcgcgtcgtcggctcaggcg
cggatcgcggcgcgtaaggcgcgtgagttggtgcggcgtaagagcgcgacggacatcggt
gggttgccgggcaagctggccgactgccgttcgacggatccgtccaagtccgagctgtat
gtggtggagggtgattccgcgggtggttcggccaagagtggccgggattcgatgttccag
gcgatcctgccgttgcgaggcaagatcatcaacgtcgagaaggcccggatcgaccgggtg
ctgaagaacaccgaggtgcagtcgatcatcaccgcgctgggcaccggtatccatgacgag
ttcgacatctccaagctgcggtatcacaagatcgtgttgatggccgatgcggatgtggac
ggtcagcacatctcgacgttgttgttgacgttgttgttccggttcatgaagccgttggtg
gaaaacggccacatcttcttggcgcagccgccgttgtacaagctcaagtggcagcgcagt
gagccggagttcgcgtattccgatcgtgagcgtgacgggctgttggaggccgggcgcgcg
gcgggcaagaagatcaacgtcgacgacggtatccagcgctacaagggtctgggcgagatg
gacgccaaggagttgtgggagaccacgatggatccgtcggtgcgggtgctgcgacaggtc
accctcgacgatgctgccgcggccgacgaactgttctccatcctcatgggcgacgacgtg
gaggcgcgacgagggtttatcacccgcaacgccaaagacattcgcttcctcgacatctga
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