Mycolicibacterium smegmatis INHR1: LI99_07625
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Entry
LI99_07625 CDS
T03409
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msn03016
]
LI99_07625
Enzymes [BR:
msn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LI99_07625
Transfer RNA biogenesis [BR:
msn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LI99_07625
Prokaryotic type
LI99_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIU13386
LinkDB
All DBs
Position
1615468..1616376
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AA seq
302 aa
AA seq
DB search
MTPSSHQDTRNMPAIESGGGHVRLRLDIAYDGTDFAGWAVQAGQRTVAGVIDEALTTVFR
TPVVTRVAGRTDTGVHATGQVAHVDVPAEALPHAYPRHTRPTDAEFTPLVRRLAGFLPAD
VRVRDIVRAPAGFDARFSALRRHYVYRLTTAPYGPEPHETRFVTPWTRPLDVDAMNAAAQ
ELLGLNDFAAFCRYRAGATTIRDLQRLEWVRNGFYINAYVTADAFCWNMVRSLVGALLKV
GEGRRSPEWTAELLGATSRSSEFPAAPARGLTLAAVDYPPDDELEARNVVTRDVRTIDQS
RD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaagtagtcatcaggacacgcgcaacatgcccgccatcgaatccggtggcggg
catgttcgtcttcgcctcgacatcgcctacgacgggaccgatttcgcgggctgggccgtg
caggccggccagcgtacggtcgccggggtgatcgacgaggcgctgacgacggtgttccgc
acgcccgtggtgacgcgcgtcgccggccgcaccgacaccggcgtccacgccaccggccag
gtcgcgcatgtcgacgtcccggccgaggcgttgccgcacgcctatccgcggcacacgcgt
cccaccgatgccgagttcacgccgctggtgcggcggctcgcgggcttcctgcctgccgat
gtgcgggtccgcgacatcgtgcgtgcacctgcgggtttcgacgcgcggttctcggcgctg
cgccgccactacgtctaccggctcaccaccgctccgtacgggcccgaaccgcacgagacg
cggttcgtcacgccgtggacccgcccgctcgacgtcgacgccatgaacgccgccgcacag
gaactgctgggcctcaacgacttcgcggcgttctgccggtaccgggccggtgccaccacg
atccgggacctgcagcggctggagtgggtgcgcaacggcttctacatcaacgcctacgtc
acggccgacgcgttctgctggaacatggtgcgctcactcgtgggcgcgctgctgaaggtg
ggggaggggcggcgctccccggaatggaccgccgaactgctcggcgccacaagccgatcc
agcgagttcccggccgcgccggcgcgcgggctcaccctggcggccgtcgactacccgcct
gacgacgagctggaggcgcgcaacgtcgtcacacgcgatgtgcgcaccatcgaccagagc
cgcgactag
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