Mycolicibacterium smegmatis INHR1: LI99_08860
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Entry
LI99_08860 CDS
T03409
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msn03016
]
LI99_08860
Enzymes [BR:
msn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LI99_08860
Transfer RNA biogenesis [BR:
msn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LI99_08860
Prokaryotic type
LI99_08860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AIU13624
UniProt:
A0A653FKH9
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All DBs
Position
complement(1863654..1864583)
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AA seq
309 aa
AA seq
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MSTRELVVLGTASQVPTRLRNHNGYLLRWDNEGFLFDPGEGTQRQMLLAGVSASSVTHLC
LTHFHGDHCLGVPGIVQRMSLDHVAHPVEAHYPASGQEFFTRLRNASAFHDTVDVRENPV
EADGPVAIGAFGTLEARRLDHSVDSIGYRLTEPDSRRIRSDLLALYGIHGPAVGELQREG
TIRVGPDTEPEVVHLTQVSEPRPGQRFAFVMDTRLCDAVYALADGTDMLVIESTFLNEHA
GLALKYGHLTARQAARVAAECHVRKLVLTHFSQRYGDTQRHFEEAAEVYHGELVVADDLA
RIAVGHRSS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgcgcgagctggtcgtcctcggtaccgcgagccaggttcccacgcgcctgcgc
aatcacaacggatacctgttgcgctgggacaacgagggtttcctgttcgatccgggcgag
ggcacccaacgccagatgctgctggcgggtgtctcggcgagttcggtcacgcacctgtgc
ctgacccacttccacggcgatcactgcctcggggtgcccggcatcgtgcaacgcatgtca
ctggatcacgtcgcgcatccggtcgaggcccactaccccgcctcggggcaggaattcttc
acccgtttgcgcaacgccagtgcgttccacgacaccgtcgacgtccgggaaaatccggtg
gaggcggacggaccggtcgccatcggtgcgttcggaaccctcgaagcgcgccggctcgat
cattccgtcgattcgatcggctatcggttgaccgaacctgactctcggcgcatacgctca
gatctgctggcgctgtatgggattcacggacccgctgtcggagaattgcagcgcgagggg
acgattcgggtgggcccggataccgaacccgaagttgtgcacctcacccaggtcagcgaa
ccgcggcccgggcagcggttcgccttcgtgatggacacccggttgtgcgacgcggtgtac
gcgctagccgacggcaccgacatgttggtcatcgagtcgacattcctcaacgaacacgcc
ggtctggcattgaaatacggccacctgaccgcacgtcaggccgcgcgcgtggcagcagag
tgccacgtgaggaaactcgtgctgacccatttctcacaacgctacggcgatacacagcgt
cacttcgaagaggcggccgaggtttaccacggggagctcgtcgtggcggatgacctggcg
cgcatcgccgttggacaccgctcgtcgtag
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