Mycolicibacterium smegmatis INHR1: LI99_09745
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Entry
LI99_09745 CDS
T03409
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn03420
Nucleotide excision repair
msn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LI99_09745
03430 Mismatch repair
LI99_09745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_09745
Enzymes [BR:
msn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LI99_09745
DNA repair and recombination proteins [BR:
msn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LI99_09745
MMR (mismatch excision repair)
Other MMR factors
LI99_09745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_22
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AIU13796
LinkDB
All DBs
Position
2029209..2031338
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AA seq
709 aa
AA seq
DB search
MVGMPLEAPSPTLEDLDDEQREAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVAGGHVAA
GQVLAVTFTARAAGEMRARLRALGQQTGVPTGAVQAVTFHAAARRQLQYFWPRLVGDTGW
ELLDSKFSVVAQAANRAGLQPSTDDVRDLAGEIEWAKASLITPEAYGAAVAKVGRDIPLD
AQKVAAVYSGYEALKARRDGSALLDFDDLLLHTAAAIENDAAVAQEFRDRYRCFVVDEYQ
DVTPLQQRVLDAWLGDRDDLTVVGDANQTIYSFTGATPRYLLDFSRRFPDAAVVRLERDY
RSTPQVVSLANRVIAGARGRMAGSKLHLVGQRDPGPKPTFNEYPDEVAEAKGVAKAIQKL
IEKGTAPAEIAVLYRINAQSEVYEEALTEAGIAFQVRGGEGFFSRQEIRQALVALQRAAE
REVEITDLPVFVRELLEPLGLTAEAPAGTRARERWEALVALAELVEEEVALRPELDLRAL
VGELRQRADARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALSHGPDSEPV
EEERRLLYVGVTRARVHLALSWALARTPGGRQGRRPSRFLNGIAPQTENSSSGPDRPRRQ
RGPAPRCRICNAALSTPQAIMLRRCETCPSNLDEDLLAELKEWRLRVSKEMKVPAYVVFT
DTTLMAIAETLPTDDAALVAIPGIGARKLEQYGEDVVALVRGRANRHDS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcatgccgttggaggcccccagcccaaccttggaagatctggacgacgaacag
cgggaagcggtgctggctccccgcgggccggtctgtgtgctggccggggccggtaccggt
aagacccgcaccatcacccggcggatcgcgcacctggtggccggcgggcacgtcgcggcc
ggccaggtcctcgcggtgacgttcaccgcgcgtgcggcgggggagatgcgggcccggttg
cgggcgctcggccagcagaccggggtcccgacgggtgcggtgcaggcggtgacgttccac
gcggccgcacgcaggcagctgcagtacttctggccgcggctcgttggcgacaccggatgg
gaactgctcgacagcaagttctcggtcgtcgcccaggccgccaaccgcgccggcctccag
cccagcaccgacgacgtacgcgacctcgcgggcgaaattgaatgggccaaggcatctttg
atcacccccgaggcgtacggcgccgcggtcgccaaggtgggacgcgacatcccgctcgat
gcgcagaaggtcgccgcggtctactccggctacgaggcgctcaaagcgcgccgcgacgga
tcggccctgctcgacttcgacgatctgctgttgcacacggccgcggccatcgagaacgac
gccgcggtggcccaggagttccgcgaccggtaccgctgcttcgtcgtcgacgaatatcag
gacgtcacgccgttgcagcagcgcgtgctcgacgcctggctgggcgaccgtgacgatctc
accgtcgtgggtgacgccaatcagaccatctactcgttcaccggcgccacgccgcgctat
ctgttggatttctcgcggcgtttccccgacgcggcggtggtgcgtctcgaacgtgactac
cgctccacgccgcaggtggtgtcgctggccaaccgggtgatcgcgggtgcgcgtgggcgg
atggccggcagcaagctgcatctggtgggccagcgggacccgggccccaagccgacgttc
aacgagtaccccgacgaggtggccgaggccaagggcgtggccaaggccatccagaagctg
atcgaaaaaggcaccgcgccggccgaaatcgcggtcctctaccgcatcaacgcgcagtcg
gaggtgtacgaggaggcgctcaccgaagccggcatcgcgttccaggtgcgcggcggggag
ggcttcttcagccgtcaggagatccgtcaagccctcgtcgcgctgcaacgcgccgccgaa
cgtgaggtcgagatcaccgatcttcccgtgttcgtccgcgaactgctggaaccgctgggc
ctcaccgcggaggcgcccgcgggcaccagggcgcgggagcggtgggaggcgctggtcgcg
ctcgccgaactcgtcgaggaagaggtcgcgctgcggcccgaactggatctgcgcgcgctg
gtcggcgaactgcgtcaacgcgccgacgcgcggcacccaccggtggtgcagggtgtgact
ctcgcgtcgctgcacgcggccaagggcctcgaatgggacgcggtgttcctcgtcggtctg
gccgatggcaccctgccgatctcgcatgcgctttcccacggtcccgacagtgaaccggtc
gaggaggagcgcaggctgctctacgtcggcgtcacccgcgcacgcgtgcacctcgcgctg
agttgggcccttgcccgcacccccggtgggcggcaggggcggcggccctcgcggttcctc
aacggcatcgcgccgcagacggagaattcgtcatcgggtccggaccggccgcgtcggcag
cggggacccgctccgcgctgccgcatctgcaacgcggcactgtccaccccgcaggccatc
atgctgcggcggtgcgagacgtgcccgtccaatctcgacgaggacctgctcgccgaactc
aaggaatggcggttgcgtgtctcgaaggagatgaaagtgcctgcctacgtggtgttcacg
gacaccacgctgatggcgatcgccgagaccctgcccaccgacgacgccgcactcgtggcc
atcccgggcatcggggcgcgcaagctcgagcagtacggcgaggacgtcgtggcgctcgtg
cggggacgcgccaaccgccacgattcgtaa
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