Mycolicibacterium smegmatis INHR1: LI99_11880
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Entry
LI99_11880 CDS
T03409
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
msn
Mycolicibacterium smegmatis INHR1
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msn03032
]
LI99_11880
03036 Chromosome and associated proteins [BR:
msn03036
]
LI99_11880
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_11880
DNA replication proteins [BR:
msn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LI99_11880
Chromosome and associated proteins [BR:
msn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LI99_11880
DNA repair and recombination proteins [BR:
msn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LI99_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AIU14197
UniProt:
Q4PLR8
LinkDB
All DBs
Position
2471529..2472155
Genome browser
AA seq
208 aa
AA seq
DB search
MNKAELIDVLTTKMGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVISGAQKLPADGPAVKRGVTAGPAKKAAKKAPA
KKAAAKKTATKAAAKKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAAA
KAPAKKAATKAPAKKAAAKKAPAKKGRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggagctcatcgacgtactcacaaccaaaatgggcaccgatcgtcggcag
gctaccgccgcggtggagaacgtcgtcgacaccatcgtgcgcgcggtgcacaagggcgat
agcgtgacgatcaccgggttcggtgtcttcgagcagcgccgccgcgccgctcgcgtggcc
cgtaacccgcggaccggtgagaccgtgaaggtcaagccgacctcggtgccggcgttccgt
cccggtgcgcagttcaaggcggttatctctggcgcacagaagctcccggccgatggtccg
gccgtgaagcgtggcgtcaccgctggtcccgccaagaaggccgccaagaaggcaccggcc
aagaaggccgccgccaagaagacggcgaccaaggctgcggcgaagaaggccccggccaag
aaggccgcgaccaaggctccggcgaagaaggccgcgaccaaggctccggcgaagaaggcc
gcgaccaaggctccggccaagaaggccgcgaccaaggctccggccaagaaggccgccgcc
aaggctccggccaagaaggccgcgaccaaggctccggccaagaaggccgccgccaagaag
gccccggccaagaagggccgcaggtaa
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