Mycolicibacterium smegmatis INHR1: LI99_11930
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Entry
LI99_11930 CDS
T03409
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LI99_11930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_11930
Enzymes [BR:
msn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LI99_11930
DNA repair and recombination proteins [BR:
msn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LI99_11930
Prokaryotic type
LI99_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIU14207
LinkDB
All DBs
Position
2481540..2482223
Genome browser
AA seq
227 aa
AA seq
DB search
MTARPLNELVEEGWARALEPVADQVAQMGEFLRTELAEGRQYLPAGQNVLRAFTFPFDQV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPLPRSLSNIFTEYTEDLGHPQPSSGDLTPWAE
RGVMLLNRVLTVRPGTPASHRGKGWEAVTECAIRALVAREQPLVAVLWGRDAATLKPMLA
EGDCATIESPHPSPLSASRGFFGSRPFSRVNELLQRRGIEPIDWKLP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacgaccgctgaacgaactcgtcgaggaaggttgggcccgcgcgctggagccc
gtggcagatcaggtggcgcagatgggggagttcctgcgcaccgaactcgccgagggcagg
cagtacctgcccgccgggcagaatgtgctgcgggcgttcacatttccgttcgatcaggtg
agggtgctgatcgtcgggcaggatccctacccgacaccgggccacgcggtgggcctgagc
ttctcggtcgcgcccgacgtgcggccgctgccgcgcagcctgtccaacatcttcaccgag
tacaccgaggatctcggccacccgcagcccagcagcggcgatctgacgccgtgggcagag
cgtggggtgatgctgctcaacagggtgctcacggtgcgcccgggaacaccggcgtcccac
cgcggtaaaggatgggaggccgtcaccgaatgcgccatccgcgcgctcgtggcgcgcgag
cagccgttggtggcggtgttgtgggggcgcgatgccgcgacgctgaagccgatgctggcc
gaaggtgactgcgcgacgatcgagtcgccgcatccctcgccgctgtccgcgtcacgcggg
ttcttcgggtcgaggcccttcagtcgcgtcaacgaactgctccagcgtcgcggcatcgaa
ccgatcgactggaagttgccctag
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