Mycolicibacterium smegmatis INHR1: LI99_18860
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Entry
LI99_18860 CDS
T03409
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LI99_18860 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msn01007
]
LI99_18860 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msn03016
]
LI99_18860 (lysS)
Enzymes [BR:
msn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LI99_18860 (lysS)
Amino acid related enzymes [BR:
msn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LI99_18860 (lysS)
Transfer RNA biogenesis [BR:
msn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LI99_18860 (lysS)
Prokaryotic type
Other AARSs
LI99_18860 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AIU15540
UniProt:
A0A653FGF9
LinkDB
All DBs
Position
3863092..3866412
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AA seq
1106 aa
AA seq
DB search
MTVISRVEHLPARPASRVAWVPAAAGWTVGVIATLSLIASVSPLVRSLIRVPREFVNDFI
FNFPDTSFAWAFVLALLAAALAARKRIAWWVLVLYLVGAIGWNVGDLAAGGDTVADDIGE
LIGIAFHVAAIVFLVVARKEFWAKVRRGALLKSAAVLVAGNLIGIVVAWGLLQAFPGTLD
PEWRLPYAVNRVSGFATVPTEVFEGYSHTFLNAIFGLFGALALMAAAIVLFQSQRASNAL
TGEDESAIRGLLELYGKNDSLGYFATRRDKSVVFAPNGRAAITYRVEVGVCLASGDPVGD
PKSWPQAIAAWLQLCQAYGWAPGVMGASLAGAEAYRAAGLNALQLGDEAILHPDRFRLSG
PDMRAVRQAVTRARRAGTSVRIRRHRELSPEEMAAVIRRADAWRDTETERGFSMALGRLG
DPADDDCLLVEAVQGDEVVAMLSLVPWGSNGVSLDVMRRSPRSPNGTIELMVSELCMQAE
DIGISRISLNFAMFRSAFEQGAQLGAGPVARLWRALLVFFSKWWQLESLYRSNMKYQPEW
VPRYACYEDARLVPRVGVASVIAEGFLVLPFSRRNKQHTGEHIAAPDTLVQSGRLHRDGS
APDVTGLQGELPDADDEPRLPEQVRVRMAKLKALQGNGVDAYPVGQPPSHTVAQALGATD
GETLSVAGRVMRIRDYGGVLFAQLRDWSGEVQLLLDNAALTEGETADFTATIDLGDLVEV
TGSMGFSRNGTRSLLVERWRLIGKCLRPLPDKWKGLTDQEARVRARYVDLAVNTEARDLI
RARSGALHAIRETLYSKGFLEVETPILQQIHGGANARPFLTHINAYDLDLYLRIAPELYL
KRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYNVWIDGCRELIQNAAQA
ANGAQVFLRPRPNDPAGTLEPVDISGQWAVKTVHDAVSEAIGEHITPETELGELRRLCDS
AGIPYLTHWDAGAVVLEMYEHLVEDRTTEPTFYKDFPTSVSPLTRPHRSIPGVAERWDLV
AWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGM
GVDRVVMMITGRSIRETLPFPLAKPR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaatcagtcgcgtcgagcacctcccggcgcgtccggcctcccgagtggcctgg
gtgcccgcggcagcgggctggaccgtcggcgtcatcgcgaccctctcgttgatcgccagc
gtctcgcctctcgtgcgctcgctcatccgggtgccgcgggagttcgtcaacgacttcatc
ttcaacttcccggacaccagcttcgcctgggcgttcgtcctggcgctgctggccgccgcg
ctggcggcccgcaagcgcatcgcgtggtgggtcctggtgctctacctggtgggtgccatc
ggctggaacgtgggcgatctcgcggcgggcggcgacaccgtcgccgacgacatcggcgag
ctcatcggcatcgccttccacgtcgcggcgatcgtgttcctggtggtggcccgcaaggag
ttctgggccaaggtccgccgcggcgctctgctcaagtcggcggcggtgctggtggccggc
aacctgatcggcatcgtcgtggcgtggggactgctgcaggcgttcccgggcacccttgac
cccgagtggcggttgccgtacgcggtcaaccgggtcagcgggttcgcgaccgtgcccacc
gaggtgttcgagggttactcgcacacgttcctcaacgcgatcttcggcctgttcggcgca
ctggctttgatggccgcggcgatcgtgctgttccaatcgcagcgcgcgtcgaacgcgctc
accggtgaggacgagtccgccatccgggggctgctcgagctctacggcaagaacgactcc
ctcggctacttcgcgacccgccgcgacaagtcggtggtgttcgcgccgaacggacgcgcc
gcaatcacctaccgcgtcgaggtcggcgtgtgcctggccagtggcgaccccgtcggtgac
cccaagtcgtggccgcaggccatcgcggcgtggttgcagttgtgccaggcctacggctgg
gcacccggcgtgatgggcgcgagcctggcgggcgccgaggcctaccgggccgcgggtctc
aacgcgctgcaactgggcgacgaggcgatcctgcaccccgaccgcttccggttgtcggga
cccgacatgcgcgccgtgcgccaggccgtgacccgcgcgcgccgggcaggcacctcggtg
cggatccggcggcaccgcgaactgtcacccgaggagatggccgcggtgatccggcgtgcc
gacgcgtggcgcgacaccgagaccgaacgcggcttctcgatggcgctgggccggctgggc
gatcccgccgacgacgactgtctgctggtcgaggccgtgcagggcgatgaggtggtggcg
atgctgtcgctcgtgccgtggggcagcaacggtgtgtcgctcgacgtcatgcgacgctca
ccgcggtcgcccaacggcaccatcgagctgatggtcagcgagctgtgcatgcaggccgag
gacatcggcatcagccggatctcattgaacttcgcgatgttccgctcggcgttcgagcag
ggcgcgcagctgggtgccgggccggtcgcgcggctgtggcgggccctgctggtgttcttc
tccaaatggtggcagctggagagcctgtaccgctccaacatgaagtaccagcccgagtgg
gtgccgcggtacgcgtgttacgaggacgcgcggctggtgccgcgggtcggtgtggcgtcg
gtgattgcggaaggctttctggtgcttccgttctcgcgacgcaacaagcaacacaccggc
gagcacatcgccgcacccgacaccctggtgcagtccgggcgactgcaccgcgacggcagc
gcacccgacgtcaccgggctgcagggcgagctgcccgacgccgacgacgagccccgcctg
cccgagcaggtccgcgtgcgcatggccaaactcaaggcgttgcagggcaacggcgtcgac
gcctaccccgtggggcaaccgcccagccacaccgtcgctcaggcccttggcgccaccgat
ggcgagacgctgtcggtggccggccgtgtgatgcggatccgcgactacggcggcgtgctg
ttcgcgcaactgcgggactggtcgggtgaggtccaattgctgttggacaacgccgcactg
accgagggcgagaccgcggacttcaccgcgacgatcgacctgggcgacctcgtcgaggtg
accggttcgatgggcttcagccgcaacggaacccgctcgctgctggtcgagcgctggcga
ctgatcggcaagtgcctgcgcccgctgcccgacaagtggaagggcctcaccgaccaggag
gcccgtgtgcgggcccgctatgtcgacctggccgtcaacaccgaggcgcgcgatctgatc
cgcgcacgcagcggcgcgttgcacgccatccgggaaaccctgtactccaagggtttcctc
gaggtcgagaccccgatcctgcagcaaatccacggcggcgccaacgccaggccgttcttg
acccacatcaacgcctacgacctggacctgtatctgcggatcgcacccgagctgtacctc
aagcggttgtgcgtgggcggtgtcgagcgggtcttcgaactgggccgcgcgttccgcaac
gagggcgtcgacttcagccacaaccccgagttcacactcctggaggcctatcaggcgcac
gccgactacaacgtgtggatcgacggctgccgcgagctgatccagaacgcggcacaggcc
gccaacggtgcgcaggtgttcctgcggccccgcccgaacgatccggccgggaccctcgag
cccgtcgacatctccgggcagtgggccgtcaagaccgtgcacgacgcggtctccgaggcg
atcggcgagcacatcacgcccgagaccgagctgggcgagcttcggcgcctgtgtgattcg
gccggtattccctacctgacgcactgggacgccggcgcggtggttctggagatgtacgag
cacctggtcgaggaccgcaccaccgaacccacgttctacaaggacttcccgacgtcggtg
tcgccgctgacccggccgcaccgcagcatcccgggggtcgccgaacgctgggacctggtg
gcgtggggcgtcgaactcggcacggcctacagcgagctgaccgatccggtcgagcagcgc
cgccgcctgcaggagcagtccctgcttgcggccggtggtgatcccgaggcgatggaactc
gacgaggacttcctgcaggccatggagtacgccatgccgccgaccggcggcctgggcatg
ggcgtggaccgcgtggtcatgatgatcaccgggcgcagcatccgtgagacgctgccgttc
ccgctcgccaaaccgcgttag
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