Mycolicibacterium smegmatis INHR1: LI99_31075
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Entry
LI99_31075 CDS
T03409
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn03030
DNA replication
msn03430
Mismatch repair
msn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LI99_31075
03430 Mismatch repair
LI99_31075
03440 Homologous recombination
LI99_31075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msn03032
]
LI99_31075
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_31075
Enzymes [BR:
msn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LI99_31075
DNA replication proteins [BR:
msn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LI99_31075
DNA repair and recombination proteins [BR:
msn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LI99_31075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_19
DnaX_C
Rad17
TmcA_N
AAA_14
Mg_chelatase
AAA_16
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIU17899
UniProt:
A0A653FAM2
LinkDB
All DBs
Position
complement(6349574..6351571)
Genome browser
AA seq
665 aa
AA seq
DB search
MALYRKYRPATFSEVVGQEHVTEPLCTALTAGRINHAYLFSGPRGCGKTSSARILARSLN
CDQGPTPTPCGVCDSCVALAPNGPGNVDVVELDAASHGGVDDTRELRDRAFYAPAQSRYR
IFIVDEAHMVTTAGFNALLKIVEEPPDHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPR
TMRPLLERICAEENVEVDDAVYPLVIRAGGGSPRDTLSVLDQLLAGSEQGANGNHITYQR
ALSLLGATDLALIDDAVEALAANDAAALFGAVEAVVDAGHDPRRFATDLLERFRDLIVLQ
AVPDAVTRGVVDAPTDVLERMREQAERLGAGTLTRYAEVVHAGLGEMRGATAPRLLLEVM
CARLLLPSAADTESALLQRIERIETRLDMSIPAGEASSGVAPAEPAKQFVRRSQAAAASP
PAAEPAPATPPTPAAPPTPAAPPAPAVAAPPAPAPAPQAPRPEPPVARPAPEPPPRPAPE
PVAPPPPAAPVPAAAPAAPAPAAETGSVPGQPNAAAVRSMWSTVREKVRQRSRTTEVMLS
GAIVRAVEGDTLVLSHESAPLAKRLTESRNSEVIREALKDALGVNWKVRCVTGAPEAAVA
APPAATGGAAPQAPAPDPVEIARAEEDDMLAEAAAEPSESMPRRDPEEVALELLQNELGA
RRIDG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtggctctctaccgcaagtaccgcccggcaaccttctccgaagttgttgggcaggagcat
gtcaccgagccgctgtgcactgcgctcaccgcgggccggatcaaccacgcgtacctgttc
tcgggtccgcgcggctgcggtaagacgtcgtcggcgcgcatcctggcccgctcgctcaac
tgtgatcaggggccgacgccgacgccgtgcggcgtgtgcgactcgtgcgtggcgctggcg
cccaacgggcccggcaacgtcgacgtcgtcgaactcgacgcggccagccacggcggtgtg
gacgacacccgcgaactgcgcgaccgcgcgttctacgcgccggcccagtcgcggtaccgc
atcttcatcgtcgacgaggcgcacatggtcaccacggccggcttcaacgcgctgctcaag
atcgtcgaggagccgccggaccacctgatcttcgtgttcgccaccaccgaacccgaaaag
gtgctgccgaccatccgctcgcgcacgcaccactacccgttccgcctgctggcgccccgc
accatgcggccgcttcttgagcgcatctgcgccgaggagaacgttgaggtcgacgacgcc
gtgtatccgctggtcatccgcgccggcggcggatctccgcgtgacacgctctcggtgctc
gaccagctgctggccggttccgagcagggcgccaacggcaaccacatcacctaccagcgc
gcgctgtcgctgctcggggccaccgacctggcgctcatcgacgacgccgtcgaggcgctc
gccgcgaacgacgccgcggcgctgttcggcgccgtggaggccgtggtcgacgcgggccac
gatccgcgccgcttcgccaccgatctgctggaacggttccgcgacctgatcgtgctgcag
gccgtgcccgacgccgtcacccgcggcgtggtcgacgcgcccaccgacgtgcttgagcgg
atgcgtgagcaggccgaacgcctcggggcggggacgctgacccgttacgccgaggtggtg
cacgcgggcctcggcgagatgcgcggtgccaccgcgccgcgtctgctgctcgaagtgatg
tgcgcgcggttgctgctgccgtcggcggccgacaccgaatcggcgctgctgcagcgcatc
gaacgcatcgagacccggctcgacatgtccatcccggccggcgaggcgtcctcgggcgtt
gcgcccgcagaaccggccaagcagttcgtgcgtcgcagccaggccgccgccgcttcgccg
cctgccgccgaacccgcaccggccacgccgcccactcctgccgcgccgcccactcctgcc
gcgccgccggcccccgcagttgccgcgccgcccgcaccggctcccgctccgcaggcaccg
cgtccggagcctcccgtggcacgcccggcccccgagccgccaccgcgcccggcgcccgaa
cccgtggcgccgcccccacctgccgcacccgtacctgccgcagcgcctgcggcgccggcc
ccggcagcggaaaccggttctgtgccagggcaacccaacgccgccgcggtgcgcagcatg
tggtcgaccgtgcgcgagaaggtccgccagcgcagccgcaccaccgaggtgatgctgtcc
ggtgcgatcgtgcgcgcggtcgaaggtgacacgctggtgctcagccacgagtcggcgccc
ctggccaaacgtctcaccgaatcgcgcaactccgaggtgatccgcgaggccctcaaggat
gcgctgggtgtcaactggaaggtccgctgcgtcacgggtgcacccgaagcggcagtggcg
gccccacccgcggcgaccggtggcgcggccccgcaggcgcccgccccggatccggtcgag
atcgcgcgtgccgaggaggacgacatgctggccgaggcggccgccgagccgtcggagtcg
atgccgcgccgcgaccccgaagaggtggcgctcgaactgctgcagaacgaactcggggcc
cggcgcatcgacgggtag
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