Mycoplasmopsis synoviae ATCC 25204: VY93_00310
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Entry
VY93_00310 CDS
T04518
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mso
Mycoplasmopsis synoviae ATCC 25204
Pathway
mso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VY93_00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mso03400
]
VY93_00310
DNA repair and recombination proteins [BR:
mso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VY93_00310
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VY93_00310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA
AAA_7
AAA_30
Es2
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AKB10841
LinkDB
All DBs
Position
61673..63679
Genome browser
AA seq
668 aa
AA seq
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MKIFKLNSNFTPQGDQPKAINELVQGIKNNRKDQVLLGVTGSGKTFTIANVIKEFDRPVI
ILSHNKTLASQLYSELKAFFPENAVEYFISYFDYYRPEAYKANTDTYIEKDSATNQQIEI
LRLSAYNSLLTRKDVIVVASVSAIYGALNPEVYNKSFYNFYLNQKISVKDFIIKLTKNKY
ERNDLDVVPGRFAVKGDLVFIAPADSETKMIRVSFSYDEIEEIAFVHPLEKTTIKKVSHY
TLSPGDAYATDNSIYSTVIPQIQEELKERVKYYKDNNQILEATRINQRTNNDIDDMKEFG
HCKGIENYSMYLDGRTFGQRPYTILDYFPENSLMFIDESHMSLPQIRAMHAGDRSRKNEL
VKYAFRLPSALENRPLTFDEFENSFSFNKIYISATPEAYEINKTAGAVTTLYVRPTGLID
PEIFIYPKENQIERIYNIIMEQRKTGEKTLVLTVTKRLAEEISNYFIDRKIKAAYIHSDH
ETFVRNEILRKLRMGTYEVVIGINLLREGIDIPEVSKVIILDADSNGFLRNTKSLIQIVG
RAARNANGQAILFADTITNAIKEMMEDNKIKRKIQMEYNQKYRIVPKTIIKPIRGAIYNE
NYENAMEILLKKSQESKFSKNEKKTLNSLIEDLEIQMKKAAKEYDYEEAIRLRDMIHEIK
QSQSNKGK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttttaaattaaattcaaattttactccgcaaggagatcaaccaaaagcaatt
aatgaacttgttcaaggaattaaaaacaaccgtaaagatcaagttcttttaggagttacc
ggaagcggtaaaacttttactattgccaacgttattaaagaatttgatcgcccggttatt
atattaagtcacaataaaacgctagctagtcagctttattcagaacttaaagcgtttttt
cctgaaaacgcagttgaatattttattagttactttgattattatcgccctgaagcttat
aaagcaaataccgatacttatatagaaaaagattcagctacaaaccagcaaattgaaatt
ttacggctaagcgcttataattcgctacttactagaaaagacgtaatagtagtagctagc
gttagcgcgatttatggtgcgcttaatcctgaagtttacaataaaagtttttacaacttt
tatttaaaccaaaaaataagtgttaaagactttatcatcaagctaaccaaaaacaaatac
gaaagaaatgaccttgacgttgttcctggaagatttgcagttaaaggtgatttggttttt
atcgctccagcagactctgaaactaaaatgattagagtttcattttcttatgatgaaatt
gaagaaattgcttttgttcatccattagaaaaaactaccattaaaaaagtatctcactat
acactatctcctggtgatgcttatgctactgataatagtatttacagcacagtaattcct
caaatccaagaagagctcaaagaaagagtaaagtactataaagacaataaccaaattcta
gaagctactagaatcaatcaaagaactaataacgatatagatgacatgaaagaatttggt
cactgcaaaggaatcgaaaactactctatgtatttagatggtagaacctttggtcaaaga
ccttatactatcctagattactttcctgaaaattcgctaatgtttatcgatgaatctcat
atgagccttccgcaaattcgggcaatgcatgccggtgatagatcaagaaaaaatgagctt
gtaaaatatgcctttagacttcctagtgcgctagaaaataggccactaactttcgatgaa
tttgaaaattctttttcatttaacaagatttatatatcagctactcctgaagcttatgaa
attaataaaactgcaggagcagttacaacgctatacgtaaggcctactggattaattgat
cctgagatttttatatatcctaaagaaaatcaaattgaaagaatatataacataatcatg
gagcaacgtaaaaccggagaaaaaactttggtattaacagttactaaacgactagccgaa
gaaatatctaattactttattgatagaaaaataaaagccgcttatattcattcagatcat
gaaacttttgttagaaatgaaattctaagaaaacttcgtatgggaacatacgaagtagtt
atcggaattaatcttcttcgtgaagggattgatattcccgaagtttctaaagttattata
ttagatgccgattccaatggttttctaagaaatacaaaatcgttaattcaaatagtaggt
agagcagcaagaaatgcgaacgggcaagcgatactttttgctgatactattacaaatgcc
atcaaagaaatgatggaagataataaaatcaagcgtaaaattcaaatggaatataaccaa
aagtatagaatagttcctaaaactataatcaagcctattagaggggctatttataatgaa
aattatgaaaatgcaatggaaattcttcttaaaaagagccaggagtctaaatttagcaaa
aacgagaaaaagactttaaatagcttaattgaagatctagaaatccaaatgaaaaaagcc
gcaaaagaatatgattacgaagaagcaattcgactaagagatatgattcatgaaatcaaa
caaagtcaaagcaataaagggaaataa
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