Mycoplasmopsis synoviae ATCC 25204: VY93_02880
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Entry
VY93_02880 CDS
T04518
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mso
Mycoplasmopsis synoviae ATCC 25204
Pathway
mso03030
DNA replication
mso03430
Mismatch repair
mso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VY93_02880
03430 Mismatch repair
VY93_02880
03440 Homologous recombination
VY93_02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mso03032
]
VY93_02880
03400 DNA repair and recombination proteins [BR:
mso03400
]
VY93_02880
Enzymes [BR:
mso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VY93_02880
DNA replication proteins [BR:
mso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VY93_02880
DNA repair and recombination proteins [BR:
mso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VY93_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AKB11256
LinkDB
All DBs
Position
complement(658943..661915)
Genome browser
AA seq
990 aa
AA seq
DB search
MNNKKPIYLHLKTEFSFLNSAIRLNKLFNLIESQKIEYLAITDKENLYALPYLLEFREKY
KFKLIIGCEFELDNKLEVIILAKNLAGYKLINELIYQKSNNNSINLSDLNSENIFVIDSD
TNGYLKNKKSLEVELPNFFYNSKFQLENKDNVVYAPVKKIIDKFENFTLNILDKIREEFK
ENNNFDDFYSEEEFNDLDEKIYQNTLNLADQCFELEIDKEIKLPEFSSNSKEEIESKIKA
SERTKYLLLNYDKDLVIERINYEFSIIKEQNFVDYFLIIADALSWARKNKISIGPGRGSV
SGSLVAYVLEITDVNPLDFDLLFERFLNTKRVTYPDIDIDIQDDRRSEVLDYIFEKYGQK
RCALITTFSTLGAKSAIKDVGRMLGISNSEVNLVTKTINDFDKNLTLESEYNKRNSKYKA
IVSKYENLHEYATYIEGLYRQTGVHAAGIVIANNDITNYFPINKVLDKYNQVQLSLENLE
KYGLIKIDFLGLKNLTIVKNIENLINPKLHFDNVINQNLNKFIDHKTFSILNDLKTEGIF
QLESDGMKRAISQVKIDSFEDIYAIISLYRPGPSQYIPIYGKNKKDPSQIEKVHPIYDKI
VAPTFGIIVYQEQIMQIAQEVAGLSFSEADLLRRAISKKNSQELKSYKTKFFEGGAKNNV
SSDLLNRIYSNIEKFADYGFNKSHAVAYAVLALKLAFYKSRYPFIFYKVLLDNSFSSQEN
TSKYVQEATKLKIKINAADINISSLNTVEENNNLYLSFLTIKGFGENSATKLIQERNRAG
KFKNFFDAAIRLGMIGIKKATLSLLINANIFRSFGNINTLINSLEDVSNFVDLINKKVKK
AFMALDKSEQTDGKWISLYEDFAREEQFPNILDEVEISDKEIMDLETKAYGISLSVIDES
KVENEFSLNSLNENETRNFNVILEEFDVKLNTNSKKVKINDGKVSKFAFVSDYSLSIFNK
ELLNKKINVTVTLKKSRSNFKYLLLEKWSL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaaaaacctatttatttacatttaaaaactgaattttcttttttaaattct
gccattagattaaataaattatttaatttaattgagagtcaaaaaattgaatatttagca
ataacagataaggaaaatttatacgcacttccttatttattagagtttcgcgaaaaatat
aaatttaaattaataataggttgtgaattcgaattagataataaacttgaagttataatt
ttagctaaaaatttagcaggatataaattaataaacgaattaatttatcaaaaatcaaac
aataattctattaatctttctgatttaaattcagaaaatatttttgttatagattcagat
acaaatggttatttaaaaaataaaaaaagcttagaagttgaacttccaaactttttttat
aattcaaaatttcaattagaaaacaaagacaatgtagtttatgcgcctgttaaaaaaata
attgataaatttgaaaactttaccttaaatattcttgacaaaattagagaagaatttaaa
gaaaataataactttgacgatttttatagcgaagaagaatttaatgatttagatgaaaaa
atttatcaaaatacattaaatttagctgatcaatgttttgaattagaaattgataaagaa
attaagcttcctgaattttcaagtaattcaaaggaagaaatcgaaagcaaaattaaagca
tcagaaagaactaaatatttactattaaactacgataaagatttagtaattgaaagaatt
aattatgagttttcaattattaaagaacaaaattttgttgattattttttaataatagct
gatgcattatcatgagctagaaaaaataaaataagtataggaccaggaagaggaagcgtt
tctggttctttagttgcatacgtgcttgaaataactgatgtaaaccctttagattttgat
ctgctttttgaaagatttttaaataccaaaagagttacttatcctgatatagatatcgat
attcaagacgatagaagaagtgaagtattagattatatttttgaaaaatacggacaaaaa
agatgtgctctaattactactttttcaacactaggcgctaaaagcgcaattaaagatgtt
ggtagaatgcttgggatttcaaattctgaagttaatttagttacaaaaacaattaatgac
tttgataaaaacttaactttagaaagtgaatacaataagagaaattcgaaatataaagca
atagttagtaaatacgaaaaccttcatgaatatgcaacttatattgaaggactatatcgg
caaactggagttcatgctgcaggtattgttattgcaaataacgatataacaaattacttt
ccaattaataaagttttagataaatataatcaagttcaattaagccttgaaaacttagaa
aaatatgggcttataaaaatagattttttaggattaaaaaatttaaccattgttaaaaat
attgaaaatctaattaatcctaaacttcattttgataatgttataaatcaaaacttaaat
aaatttattgatcataaaactttttcaattcttaatgatttaaaaaccgaaggaattttt
caacttgaatctgatggaatgaaaagagctatctcacaagttaaaatagatagctttgaa
gatatatacgcgattatttctttatatagaccaggaccatcacaatacattccaatatat
ggaaaaaataaaaaagatccaagtcaaattgaaaaagttcatccaatttacgacaagata
gtagctcctacttttggaataatcgtctaccaagaacaaataatgcaaatcgctcaagaa
gtagctggtctttcgttttcagaagctgatttacttagaagagcaatatcgaagaaaaat
tctcaagaacttaaaagctataaaactaaattctttgaaggtggagctaaaaataatgtt
tcatcagatctattaaatagaatctatagcaacattgaaaaatttgctgattatggattt
aataaatcgcatgccgttgcttatgcagtgcttgctttaaaacttgcattttataaatct
agatatccttttattttttataaagttttacttgacaattcattttcttcgcaagaaaat
acttcaaagtatgttcaagaagcaactaaactaaaaataaaaataaatgcagctgatatt
aacatttcaagtttaaatacagttgaagaaaataataatctttatctttcatttttaact
attaaaggttttggagaaaactctgcaactaaattaattcaagaaagaaatcgtgctggt
aaatttaaaaatttttttgatgctgcaattaggctaggaatgattggtatcaaaaaagca
actctgtcacttttaattaatgcaaatatttttagaagttttggaaatataaatacttta
attaattcattagaagacgtaagtaactttgttgatttaataaacaaaaaagttaaaaaa
gcttttatggctttagataaaagcgaacaaactgatggaaaatgaattagtttatatgaa
gactttgcaagagaagaacaatttccaaatatcttagatgaagttgaaatttcagataaa
gaaataatggatttagaaactaaagcttatggaatttctttaagtgttatcgatgaatca
aaagttgaaaatgaattctcgcttaattcacttaatgaaaatgaaacaagaaattttaac
gttatcttagaagaatttgatgttaagttaaataccaatagtaaaaaagttaaaataaat
gatggtaaagtttctaagtttgcatttgtaagtgattattcactaagcatatttaataaa
gagttattaaataaaaaaataaatgtaacagttactcttaaaaaatcaagaagtaacttt
aaatacttgctattagaaaaatggagtttataa
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