Mycolicibacterium gilvum Spyr1: Mspyr1_00060
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Entry
Mspyr1_00060 CDS
T01376
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msp03032
]
Mspyr1_00060
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_00060
Enzymes [BR:
msp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Mspyr1_00060
DNA replication proteins [BR:
msp03032
]
Prokaryotic type
DNA Topoisomerases
Mspyr1_00060
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mspyr1_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ADT96746
UniProt:
E6TGR2
LinkDB
All DBs
Position
6386..8413
Genome browser
AA seq
675 aa
AA seq
DB search
MAAQKKNAPSEYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
FATKVDVRILEDGGVQVTDDGRGIPVSMHSTGIPTIDVVMTVLHAGGKFEEGAYQVSGGL
HGVGVSVVNALSSRLEADVRKDGHEWFQTYDRSVPGTLRKGDPTDKTGTTIRFWADPEIF
ETTNYDFETIARRLQEMAFLNKGLTIELTDERVAPEEVVDDVVSDHAEAPKSAEEKAAEA
SAPQKVKHRVFHYPGGLVDFVKHINRTKTAIQPSVIDFDGKGEGHEVEIAMQWNAGYSES
VHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDPNLTGDDIREGLAAVISV
KVSQPQFEGQTKTKLGNTEVKSFVQKICNEQLNHWFESNPAEAKTVINKAVSSAQARIAA
RKARELVRRKSATDIGGLPGKLADCRSTDPTKSELYVVEGDSAGGSAKSGRDSMFQAILP
LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI
STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRTDPEFAYSDRERDGLLEAGRAAGKR
INVEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR
SFITRNAKDVRFLDV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagaaaaatgctcccagtgagtacggcgccgattccatcaaggtcctc
gaaggtctcgaagcggtccgtaaacgtccgggcatgtacatcggctccaccggcgagcgc
ggtctgcaccaccttatctgggaggtagtggacaacgccgtcgatgaggcgatggcgggc
ttcgccaccaaggtcgacgtgcgcattctcgaggacggcggtgtccaggtcaccgacgac
ggccgaggtatcccggtctcgatgcactccacgggaattcccaccatcgacgtggtgatg
accgtgctgcatgccggcggcaagttcgaagagggcgcctaccaggtgtcgggcggtctg
cacggtgtcggtgtgtcggtcgtcaacgcgttgtccagtcggcttgaggccgacgtgcgc
aaagacggacacgagtggttccagacctatgacaggtcggtgccggggactctgcgcaag
ggagacccgaccgacaagacaggtaccaccatccggttctgggccgaccccgaaatcttc
gagaccaccaactacgacttcgagaccatcgcgcggcgcctgcaggagatggcgttcctg
aacaagggactcaccatcgagctgaccgacgagcgggtcgcccctgaggaggtcgtcgac
gacgtggtcagcgatcacgccgaggcacccaagtcggctgaggagaaggccgccgaggcg
agcgcgccgcagaaggtcaagcaccgggtgttccactaccccggcggtctggtcgacttc
gtcaagcacatcaaccggaccaagaccgcgatccagccgagcgtcatcgacttcgacggc
aagggcgagggccacgaggtcgagatcgcgatgcagtggaacgccggctactccgaatcg
gtgcacaccttcgccaacaccatcaacacccacgagggcggtacccacgaagagggattc
cgcgcggcgctgacgaccgtggtgaacaagtacgccaaggacaagaagctcctcaaggaa
aaggacccgaacctcaccggcgacgacatccgggaaggcctggccgccgtcatctcggtg
aaggtgtcacagccgcagttcgaggggcagaccaagaccaagctgggcaacaccgaggtc
aagtcgttcgtgcagaagatctgcaacgagcagctcaaccactggttcgagtcaaatccc
gccgaggcgaaaaccgtcatcaacaaagccgtttcgtcagcgcaggcgcgcatcgccgca
cgcaaggcgcgtgaactggtgcggcgcaagagcgccaccgacatcggcgggctgcccggc
aagctggccgactgccgctccaccgacccgacgaagtcggaactgtatgtggtggagggt
gattcggccggcggctccgccaagagcggtcgcgactcgatgttccaggcgatcctgccg
ttgcgaggcaagatcatcaacgtcgagaaggcccgtatcgatcgggtgctgaagaacacc
gaagtgcaggcgatcatcaccgcgctcggcacgggtatccatgacgagttcgacatctcc
aagctgcgctatcacaagatcgtgctgatggccgacgcggacgtcgacggtcagcacatc
tcgacgctgctgctgacgttgctgttccggttcatgaaaccgcttgtggagaacggccat
atcttcctggcccaaccaccgctgtacaagctcaagtggcagcgcaccgatcccgagttc
gcctactccgaccgcgaacgcgacggtctgctcgaagccggccgtgccgcgggcaagcgc
atcaatgtcgaagacggcatccagcggtacaagggtctcggtgagatggacgccaaggaa
ctgtgggagaccacgatggatccgtcggtgcgtgtgctgcgccaggtcaccctcgacgac
gccgccgcggccgacgagctgttctcgatcctgatgggtgaggacgtggaggcacgtcgc
agcttcatcacccgcaacgccaaagacgttcgcttcctggatgtttaa
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