Mycolicibacterium gilvum Spyr1: Mspyr1_00070
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Entry
Mspyr1_00070 CDS
T01376
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msp03032
]
Mspyr1_00070
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_00070
Enzymes [BR:
msp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Mspyr1_00070
DNA replication proteins [BR:
msp03032
]
Prokaryotic type
DNA Topoisomerases
Mspyr1_00070
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mspyr1_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
ADT96747
UniProt:
E6TGR3
LinkDB
All DBs
Position
8445..12230
Genome browser
AA seq
1261 aa
AA seq
DB search
MTDTTLPPGDEAGDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
FDSGFRPDRGHAKSARSVAETMGNYHPHGDSSIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYCVTGDAMVRLPFGQSVRIADIVKGARPNSDNDIDVKVLDRHGDPVVANAL
FHSGDHETFAVRTAEGYEVTGTSNHPLLCLVDVGGVPTLLWKLIGEIRPGDHVVLQRTPP
VEFGPGDWREVMEALLLGAFISDGFVSESRAGFNNLDRDYFNMVLAAYDAIVGGPRYVYE
RRIASGSKLLELDVHNLRALDSSRLAELKSQRSAAKTVPNWLWNSTAAAKKAFLQALFEG
DGSCSALPHNTIQLSYSTRSGQLAKDVQNMLLEFGVISRRYLHATGEHKVVITNRAHAED
FCLRIGFGGAKQEKLQELLAALPARAAGLDGDHVPGLATFIRSRSGGRWIDKEWLRKHNI
DRLTRWRRDREEILSHISDNDVRSIATELTDGRFYYARVASVSDAGVQPVYSLRVDTDDH
SFITNGFVSHNTEARLTPLAMEMLREIDEETVDFVPNYDGRVQEPTVLPSRFPNLLANGS
GGIAVGMATNMPPHNLRELAEAVYWCLDNHEADEEATLDAVCERVKGPDFPTYGLIVGSQ
GIDDTYKTGRGSIRMRGVVEIEEDARGRTSLVITELPYQVNHDNFITSIAEQVRDGKLTG
ISNIEDQSSDRVGLRIVVEIKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLRL
DQLIRHYVNHQLDVIVRRTRYRLRKANERAHILRGLVKALDALDEVIALIRASQTVEIAR
SGLIELLDIDEIQAQAILDMQLRRLAALERQRIVDDLAKIEAEIADLEDILAKPERQRAI
VHDELKEIVDKYGDDRRTRIIPADGDVADEDLIAREEVVVTITETGYAKRTKSDLYRSQK
RGGKGVQGAGLKQDDIVNHFFVCSTHDWILFFTTQGRVYRAKAYDLPEASRTARGQHVAN
LLAFQPEERIAQVIQLKTYEDAPYLVLATRNGLVKKSRLVDFDSNRSGGIVAVNLRDGDE
LVGAVLCSADDDLLLVSAKGQSIRFSATDEALRPMGRATSGVQGMRFNEEDQLLSLNVVR
EGTYLLVATSGGYAKRTAIEEYSAQGRGGKGILTIQYDRRRGTLVGALIVDDDTELYAIT
SGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLIAIARNAEAGDSTDEVETDPDATDEE
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaccctgccgcccggcgacgaggccggcgaccgcatcgagccggtcgac
atccagcaggagatgcagcgcagctacatcgactacgcgatgagcgtgatcgtcggccgc
gcgctgcccgaggtccgcgacggtctcaagccggtgcaccgccgcgtgctgtacgcgatg
ttcgactcgggcttccgtcccgaccgcggacacgcgaaatccgcacgctccgttgccgag
acgatgggcaactaccacccgcacggcgactcgtcgatctacgacaccctggtgcgcatg
gcccagccgtggtcgctgcgctacccgctcgtcgacggccagggcaacttcggttcgccg
ggtaacgacccgccggccgcgatgcggtattgcgtcacgggcgacgcgatggttcggtta
ccttttggtcagtcggtgaggattgctgacatcgtcaagggtgccaggcccaactccgac
aacgatatcgatgtgaaggtgctcgaccgacacggagatcccgtcgtggcgaacgccctt
ttccattcgggcgatcacgagactttcgctgtgcggaccgcagaaggctatgaggtcacc
gggacctcgaaccacccgctgctctgcctcgtcgacgtcggcggcgttcccacgctcttg
tggaagttgatcggcgagatcagacctggtgaccacgttgtacttcagcggacgcctccg
gttgagttcggacccggtgactggcgggaggtgatggaagcgttgttactcggcgctttc
atcagcgatggcttcgtcagcgagtcgagggcggggttcaacaaccttgatcgcgactac
ttcaacatggttcttgcggcctacgacgcgatcgttggtgggccacggtacgtgtacgag
cggagaatcgcgtccggctcgaaactgcttgagctcgatgtgcacaacctcagggcactc
gatagcagccgtctggccgaactgaagtcacaacggtccgccgcgaagaccgttccgaac
tggttgtggaattcgactgccgcggcgaagaaagcgtttctgcaagcgctgttcgagggc
gatggttcatgctcggctctgccgcacaacacgatccaactctcgtactcgacgcgcagc
ggccagttggccaaagacgttcagaacatgctgctggagttcggtgtcatctcccggcga
taccttcacgcgacgggtgagcacaaggtcgtcatcaccaaccgtgcccacgccgaggat
ttctgcctccgtatcggctttggtggagcaaagcaggaaaagcttcaggaattgcttgct
gctctccctgcacgggcagccggtcttgacggcgaccacgtgccaggcttggcgacgttc
attcggtcgaggtccggtggcaggtggatcgacaaggagtggcttcggaagcacaacatc
gatcgccttacacggtggcgccgagatcgcgaagagatcctgagccacatttcggacaac
gatgtccgttcgatcgccaccgagctcacggatggacgcttctactatgcgcgcgtggcc
tccgtcagcgacgccggcgtgcaacccgtgtacagcctccgagtggacaccgacgaccat
tcattcatcaccaacggtttcgtcagccataacacggaagcccgcctcaccccgctggcg
atggagatgctgcgcgaaatcgacgaggagacagtcgatttcgtcccgaactacgacggc
cgggtgcaggagccgacggttctgccgagccggttccccaacctgctggccaacggctcc
ggcggcatcgccgtcggtatggccaccaacatgcctccgcacaacctccgcgagctcgcc
gaggcggtctactggtgcctggacaaccacgaggccgacgaggaagccaccctcgatgcc
gtgtgcgagcgggtcaagggccccgacttcccgacctacgggctgatcgtcggctcgcag
ggcatcgacgacacctacaagaccgggcgcggttcgatccgcatgcgcggcgtcgtcgaa
atcgaagaggatgcgcgcggtcgcacctccctggtgatcaccgagttgccgtatcaggtc
aaccacgacaacttcatcacctcgatcgccgagcaggtgcgcgacggcaagctgaccggg
atctcgaacatcgaggaccagtccagcgaccgcgtgggtctgcgcatcgtcgtggagatc
aagcgtgacgccgtggccaaggtggtgctgaacaacctctacaagcacacccagctgcag
accagcttcggcgcgaacatgctctcgatcgtcgacggcgtcccccgcacgctgcggctc
gaccaactgatccggcactacgtcaaccaccagttggacgtcatcgtgcgccgcacccgg
taccggctgcgcaaggccaacgagcgcgcccacatcctgcgcggtctggtcaaggcactc
gacgcgctcgacgaggtcatcgcgttgatccgggcatcgcagaccgtcgagatcgcccgc
agcggcctgatcgagttgctcgacatcgacgagatccaggcccaggcgatcctcgacatg
cagttgcggcgcctggccgctctcgagcgccagcgcatcgtcgatgatctggccaagatc
gaggccgagatcgccgacctcgaggacatcctggccaagccggagcgtcagcgcgcgatc
gtgcacgacgagctcaaggagatcgtcgacaaatacggtgacgatcgccgcacccggatc
atcccggccgacggcgacgtcgccgacgaggacctcatcgcccgcgaagaggtcgtcgtc
acgatcaccgagaccggctatgccaaacgcacgaaatccgacctgtaccgcagccagaaa
cgcggcggcaagggtgttcagggtgcgggcctcaagcaggacgacatcgtcaaccacttc
ttcgtgtgttcgacccacgactggatcctgttcttcaccacgcagggccgcgtctaccgg
gccaaggcctacgacctgcccgaggcgtcgcgcaccgcgcgcggtcagcacgtcgcgaat
ctgctggccttccagccggaggagcgcatcgcgcaggtgatccagctcaagacctacgag
gacgcgccgtacctggtcctcgcgacccgcaacgggctggtcaagaagtcccgcctggtc
gacttcgactccaaccgttccggcggcatcgtcgcggtgaacctgcgtgacggcgacgaa
ctcgtcggcgcggtgttgtgttcggccgacgacgatctgctgctggtgtcggcgaagggt
cagtcgatccgcttctcggcgaccgacgaggcgctgcggccgatgggccgcgccacctcg
ggtgtgcagggcatgcggttcaacgaggaagaccagctgctgtcgctcaacgtggtccgc
gaggggacgtatctgctggtggccacctccggcggttacgccaagcgcaccgcgatcgag
gagtactccgcgcagggccgcggcggcaagggcatcctcacgatccagtacgaccgtcgt
cgtggcacgctggtcggagcgctgatcgtcgacgacgacaccgagctgtacgccatcacg
tccgggggcggtgtcatccggacggcggcgcggcaggttcgtaaggccgggcgccagacg
aagggtgttcggttgatgaacctgggcgagggcgacacactgatcgcgatcgcccggaac
gctgaagccggcgacagcacggacgaggtcgagaccgacccggacgcgacggatgaggag
tcgtag
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