Mycolicibacterium gilvum Spyr1: Mspyr1_12260
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Entry
Mspyr1_12260 CDS
T01376
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Mspyr1_12260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_12260
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Mspyr1_12260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ADT97906
UniProt:
E6THV9
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All DBs
Position
complement(1247141..1248127)
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AA seq
328 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHEKDNGRIRYKRVCEVCGEVVEYRDI
AKAYESDDGQTVIITDDDISTLPEERSREIEVLEFVPAADLDPLMYDRSYFLEPEGKSTK
SYVLLAKTLAETDRVAIVNFALRNKTRLAALRVKDFSKRDVMVIHTLLWPDEIRDPDFPV
LDKDVDVKPAELKMASQVVDSMTDDFNPDRYHDDYQEQLRELVQAKLEGGEAFTTEEQPQ
ELDESEDVSDLLAKLEASVKARKAQSSGKSSDSDDSGDSDDSDDSDDSDEKDDKPAKKAP
AKKSAAKKAPAKKAAKKAPAKKAAAKKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccatctggaagggttccatcgcgttcgggctggtcaacgtcccggtcaaggtg
tacagcgccaccgaggaccatgacatcaagttccaccaggtccacgagaaggacaacggc
cgcatccgctacaagcgggtctgcgaggtgtgcggcgaggtggtcgagtaccgcgacatc
gccaaggcctacgaatccgacgacggtcagaccgtgatcatcaccgacgacgacatctcc
acactgcccgaggagcgcagtcgcgagatcgaggtcctcgagttcgtcccggccgctgat
ctcgacccgctgatgtacgaccggtcctatttcctggagcccgagggcaaatcaacgaaa
tcctatgtgctgctggccaagacgctggcggaaaccgaccgggtcgcgatcgtgaacttc
gcgctgcgcaacaagacccggctcgccgcgctccgggtcaaggacttcagcaagcgcgat
gtgatggtgatccacacactgctgtggcccgacgagatccgtgaccccgacttcccggtg
ctcgacaaggacgtcgacgtcaagcccgccgagctgaagatggccagccaggtcgtggac
tcgatgaccgacgacttcaaccccgatcgctaccacgacgactaccaggagcagctgcgc
gaactcgtccaggcgaaactcgaaggcggcgaggcctttaccaccgaggagcaaccgcag
gagctcgacgagtccgaggacgtctccgacctgctggccaagctcgaggcgagcgtgaaa
gcgcgcaaggcgcagagctcgggcaagtcctccgattcggatgactccggcgactccgac
gactccgacgactccgacgactcggacgagaaggacgacaagcccgcgaagaaggccccg
gccaagaagtcggccgcgaagaaagctccggcgaagaaggccgccaagaaggctcccgcg
aagaaggccgcggccaagaagggttag
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