Mycolicibacterium gilvum Spyr1: Mspyr1_13700
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Entry
Mspyr1_13700 CDS
T01376
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msp03032
]
Mspyr1_13700
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_13700
Enzymes [BR:
msp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mspyr1_13700
DNA replication proteins [BR:
msp03032
]
Prokaryotic type
DNA Topoisomerases
Mspyr1_13700
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mspyr1_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyphos_transf
Motif
Other DBs
NCBI-ProteinID:
ADT98048
UniProt:
E6TJ25
LinkDB
All DBs
Position
1396009..1397031
Genome browser
AA seq
340 aa
AA seq
DB search
MRLTRSKLNSAGIVRKRRGKGFAYYGPDGELLADPDTAQRIKDLVIPPAWKNVWISPSPN
GHIQAVGTDVAGRRQYLYHERWQQERAEEKFDRVLELSVRLPEWRAQIAKDLGRRGLERD
RVLALALQLLDRGYFRAGGEQSAEEFEHYGLATLLCEHVTLRNGSVVFEYPAKSGVQRNV
EIDDPEVVRAVRSLMRREDRSGRLLVCRGGADGAWVDLRADDLNARFKELVGEEFTVKDL
RTWHGTVLAAAAFADAKEPTSATRIKKETSAVMKEVSSELGNTPAVARASYVDPRVVDGY
AKGMTIASAVRRAEKAKEPDETQAILEKATRTLIKRVARG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctcacacgaagcaagctgaattcggcggggatcgtccgtaagcgtcgcggtaaa
ggcttcgcgtattacggtccagacggtgagctgctggccgaccccgacaccgcccagcgc
atcaaagatctggtgatccccccggcgtggaagaatgtctggatcagccccagcccgaac
gggcacatccaggccgtcggcaccgacgtcgccggtcggcggcaatacctgtaccacgag
cggtggcagcaggaacgggccgaggagaagttcgaccgcgtgctggagttgtcggtccgg
cttcccgagtggcgtgcgcagatcgccaaggatctgggcaggcgcgggctggaacgcgat
cgggtgctggcactcgccctgcagctgctggaccggggatacttccgcgccggcggggag
cagtcagcggaggaattcgagcattacgggctcgcgacgttgctgtgcgagcacgtgacg
ctgcgtaacggctcggtggtgttcgagtatccggccaagagcggcgtgcagcgcaacgtc
gagatcgatgatcccgaggtggttcgtgccgtgcgctcactgatgcgcagagaggacagg
tccgggcgcctgctggtatgccgcggaggggccgacggcgcgtgggtcgacctgcgcgcc
gacgatctcaatgcccggttcaaagagctcgtcggtgaagagttcaccgtcaaggatctg
cgcacgtggcacggcacagtgctcgccgccgcggcgtttgctgacgcgaaggagccgacg
tcggcgacccgtatcaagaaggagacgtcggcggtgatgaaggaggtgtcgtctgagctg
ggcaacacgcccgccgtcgccagggcgtcctatgtcgaccctcgggtcgtcgacggatac
gccaagggcatgaccatcgcgtcggccgtgcgccgcgctgagaaggcgaaagaacccgac
gagacgcaggcgatcctggagaaggccacccggacactcatcaagcgggttgcacgtggt
tga
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