Mycolicibacterium gilvum Spyr1: Mspyr1_16680
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Entry
Mspyr1_16680 CDS
T01376
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mspyr1_16680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_16680
Enzymes [BR:
msp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Mspyr1_16680
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mspyr1_16680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADT98334
UniProt:
E6TNW1
LinkDB
All DBs
Position
1692374..1693222
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AA seq
282 aa
AA seq
DB search
MMTGPRARLPHPRTGDLFETPVRPGRGWPGDPATSRTAVASNPAQVTALAAAAKNLRQLD
AGVSVCRACPRLVEWREEAASVKRKSYADQPYWGRPAPGFGSARPRILIVGLAPAAHGAN
RTGRVFTGDRSGDFLFASLHRSGLANQSTCTDSADGLELNDVRVAAAVRCAPPDNAPSPA
ERTTCAPWLDAEYRLTGTDVRVIVALGGFAWQVVLAMVRRTGGTVPVPAPKFGHAATAEL
ATPRGAVTVLGCFHPSQQNTFTGRLTPDMMDAVFATARTLSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccggtccccgagcgcgtcttccgcatccgcgcaccggtgatcttttcgagacc
ccggtgcgaccgggccgtggctggcccggcgatccggcgacctcgcgcacggccgtggcg
tcgaatcccgcccaggtgacggcgctggcggcggccgcgaagaacctgaggcagctcgac
gccggggtgtcggtgtgccgggcctgtccgcggctcgtggagtggcgggaggaagccgca
tcggtcaagcggaagtcctacgccgatcagccgtactggggtaggccggcgccgggtttc
ggatcggcgcgaccgcggatcctcatcgtcggtctggcgccggcagcccacggcgccaac
cgcaccggcagggtcttcaccggtgaccgatcgggggacttcctgttcgcgtcgttgcac
cgtagcgggctggcgaaccagtcgacatgtactgacagtgcagacggcttggagctcaac
gatgttcgcgtcgccgcggcggtacggtgcgctccaccggacaacgcgccctcaccggcg
gagcgcaccacctgcgcgccgtggctggatgccgagtaccggctcacgggaaccgacgtc
cgcgtgatcgtcgcgctcggcgggttcgcgtggcaggtcgtgctggcaatggtgcggcgt
acgggcgggaccgtcccggtaccggcgccgaaattcgggcatgcggcgaccgccgaactc
gcgacccctcgcggcgcggtcacggtgctgggatgcttccacccgagccagcagaacacg
ttcaccgggcggctcacccccgacatgatggacgccgtcttcgcgaccgcgcgcacgctc
tcgaaatag
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