Mycolicibacterium gilvum Spyr1: Mspyr1_22950
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Entry
Mspyr1_22950 CDS
T01376
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp00061
Fatty acid biosynthesis
msp00071
Fatty acid degradation
msp01100
Metabolic pathways
msp01212
Fatty acid metabolism
msp02024
Quorum sensing
msp04146
Peroxisome
Module
msp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Mspyr1_22950
00071 Fatty acid degradation
Mspyr1_22950
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Mspyr1_22950
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mspyr1_22950
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msp01004
]
Mspyr1_22950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msp04147
]
Mspyr1_22950
Enzymes [BR:
msp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Mspyr1_22950
Lipid biosynthesis proteins [BR:
msp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Mspyr1_22950
Exosome [BR:
msp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Mspyr1_22950
Exosomal proteins of breast cancer cells
Mspyr1_22950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF7158
Phage_tail_tube_init
Motif
Other DBs
NCBI-ProteinID:
ADT98940
UniProt:
E6TG87
LinkDB
All DBs
Position
complement(2373767..2375572)
Genome browser
AA seq
601 aa
AA seq
DB search
MTAREFTVPAPFTVEERDNIVGAVFTHERDDPDHVIFQRLVDGKWIDVTARQAAGQIRSA
ARGLIAEGVQAGDRVALLSATRYEWPILDFAILSIGAVTVPIYETSSAEQVQFVLADSGA
VAAIAETDAHAAHIEAQRDTLPALRRIYVIDGSVPALDELAEAGASVDAAAVDERVASIR
STDAATLIYTSGTTGRPKGCQLTHSNLLYEIRGAKACFPEHLAKGEKLLVFLPLAHVLAR
ALTIGAFSNGVTLGFTSDIKNLVPMFAVFQPTLVVSVPRVFEKVYNTAELNAETGGKGKI
FTAAANTAIEYSKALDSGGPGLVLKLKHALFDKLVYGKLRAALGGRCHAAISGGAPLGAR
LGHFYRGVGLSIYEGYGLTETSAAITVNRVGDLRVGSVGKLVPGNSMRLGEDGELLVRGG
VVFNGYWGNEEETRAVFTDGWFHTGDLGAIDDDGFLTIVGRKKEIIVTAGGKNVAPAQLE
DRLRAHPLISQAMAVGDQQPFIAALITVDTEAFPGWKERHHKASDASVADLADDPDLLAE
IELAVKDANQAVSKAEAIRKFRILPVDFTEDTGELTPTLKVKRKVVAEKFAADIEALYAK
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcgtgagttcaccgttccggcaccattcaccgtcgaagagcgcgacaacatc
gtcggcgccgtcttcacccacgaacgcgacgatcccgatcacgtgatcttccagcggctg
gtcgacgggaaatggatcgacgtcaccgcgcggcaggccgccgggcagatccgctccgcg
gcgcgcgggctcatcgccgaaggcgtgcaggccggcgatcgcgtggccctgctgtccgcg
acgcggtacgagtggccgatcctggacttcgcgatcctgtcgatcggcgcggtcacggtg
ccgatctacgagacgagctcggccgagcaggtccagttcgtgctggccgattccggcgcc
gtcgccgcgatcgccgagaccgacgcgcacgccgcgcacatcgaagcgcagcgcgacaca
ctgccggcgctgcgcaggatctacgtcatcgacggttccgtccccgcgctcgacgagctc
gccgaagccggcgcctcggtcgacgccgccgccgtcgacgagcgggtcgcgtccatcagg
tcgacggacgcggccacgctgatctacacctcgggcacgacgggccgacccaagggctgc
cagctgacccactccaacctgctctacgagatccgcggggccaaggcgtgcttccccgag
cacctggccaaaggcgagaagctgctggtgttcctgccgctggcgcatgtcctggcccgc
gcgttgaccatcggcgcgttcagcaacggcgtcaccctcggcttcaccagcgacatcaag
aacctggttccgatgttcgcggtcttccagccgacgctggtggtgtcggtgccccgggtg
ttcgaaaaggtctacaacaccgccgaactgaacgccgagaccggcggcaagggcaagatc
ttcaccgcggccgcgaacacggcgatcgagtacagcaaggcactcgacagcggcggcccc
ggtctggtgctcaagctcaagcacgcgctgttcgacaagctggtctacggcaagctgcgc
gcggcgctgggaggccgctgccacgccgcgatctccggcggcgcgccgctgggcgcccgg
ctgggccacttctaccgcggcgtcggcctgtccatctacgagggctacggcctcaccgag
accagcgcggcgatcaccgtcaaccgggtcggcgacctgcgggtcggttcggtcggcaag
ctggtgcccggcaacagcatgcgtctcggagaggacggcgagctgttggtcaggggcggt
gtcgtgttcaacggctactggggtaacgaggaggagacccgtgccgtgttcacggacggc
tggttccacaccggcgacctcggcgcgatcgacgacgacggtttcctgacgatcgtcggc
cgcaagaaggagatcatcgtgaccgccggcggcaagaacgtcgccccggcacagctggag
gaccggctgcgcgcgcatccgctgatcagccaggccatggccgtgggcgaccagcagccg
ttcatcgccgcgctgatcaccgtcgacaccgaggcgttccccggctggaaggagcgccac
cacaaggcctccgacgcctccgtcgccgatctcgccgacgatcccgacctgctcgccgag
atcgagctggcggtcaaggacgccaaccaggcggtgtcgaaggccgaggcgatccggaag
ttccggatcctgccggtcgacttcaccgaggacaccggcgagctgaccccgacgctgaag
gtcaagcgcaaggtggtggccgagaagttcgcggccgacatcgaggcgctctacgcgaag
ggctga
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