Mycolicibacterium gilvum Spyr1: Mspyr1_23080
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Entry
Mspyr1_23080 CDS
T01376
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp00900
Terpenoid backbone biosynthesis
msp01100
Metabolic pathways
msp01110
Biosynthesis of secondary metabolites
Module
msp_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Mspyr1_23080
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
Mspyr1_23080
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msp01006
]
Mspyr1_23080
Enzymes [BR:
msp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Mspyr1_23080
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Mspyr1_23080
2.5.1.29 geranylgeranyl diphosphate synthase
Mspyr1_23080
Prenyltransferases [BR:
msp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Mspyr1_23080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ADT98953
UniProt:
E6TGA0
LinkDB
All DBs
Position
complement(2386385..2387464)
Genome browser
AA seq
359 aa
AA seq
DB search
MDAAAPSAVELVNAVNEELREYLRGRRRDAAYIGTDYAVLTEALEEFVLRGGKRLRPAFA
YWGFRAVAGTEPEPHIMRLFSALELLHACALVHDDLIDASATRRGLPTVHRIFSERHRSN
NWLGSSDQFGLSAAILLGDLSLVWADDIIAEAPIDDAAHRRVQRVWAAIRTEVLGGQYLD
IVNEASGSETVASALTVNIYKTASYTISRPLQLGAAAAGDRPEILEAFHELGTSLGVAFQ
LRDDVLGVYGDPAVTGKPSGDDLRSGKRTVLLAEAVELADRHDPPAAQLLRTSIGTDLSD
AQVKELCLVIEAVGALAAVESRIDTLTRRALDIMNSAPIDVRAKAGLAELARLAANRSA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcagcggcaccgtcagccgtcgagctggtgaacgccgtcaacgaggaactgcgc
gagtacctgcgcgggcgccgccgcgacgccgcctacatcggcaccgactacgcggtcctg
acggaggctctcgaggagttcgtcctgcgcggcggcaaacggcttcgtccggcgttcgcg
tactggggattccgcgccgtcgccggcaccgagcccgagccgcacatcatgcggctgttc
tccgcactcgagctgctgcacgcgtgcgcactcgtccacgacgacctcatcgacgcgtcg
gccacccggcgcgggctgccgaccgtgcaccgcatcttcagtgagcgccaccgcagcaac
aactggctcgggtcctccgatcagttcgggctgtcggcggccattctgctcggcgatctg
tcgctggtctgggccgacgacatcatcgccgaggcgccgatcgacgacgccgcgcaccgg
cgggttcagcgcgtgtgggcggcgatccgcaccgaggtgctcggcggccagtacctcgac
atcgtcaacgaggccagcggcagcgagacggtcgcgtcggcactgacggtcaacatctac
aagaccgcgtcctacacgatctcgcgtccgctgcagctcggcgccgccgccgcgggcgac
cggcccgagattctcgaagcgttccacgaactcggcaccagcctgggggtggccttccag
ctgcgcgacgacgtgctcggcgtctacggcgatccggcggtcaccggcaaaccctccggc
gacgacctgcgctcggggaaacgcaccgtcctgctggccgaggccgtcgagctcgccgac
cggcacgacccgcccgcggcccaactgctccggacctccatcggcaccgacctcagcgac
gcccaggtcaaggagctctgcctggtcatcgaagcggtcggcgcactcgcggccgtcgag
agccggatcgacaccctcacccgccgcgccctcgacatcatgaactcggccccgatcgac
gtgcgggccaaggccgggctggcggagctcgccagattggccgcgaaccggtccgcctag
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