Mycolicibacterium gilvum Spyr1: Mspyr1_32140
Help
Entry
Mspyr1_32140 CDS
T01376
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
msp
Mycolicibacterium gilvum Spyr1
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msp03021
]
Mspyr1_32140
Transcription machinery [BR:
msp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mspyr1_32140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
HTH_10
HTH_3
MarR
KORA
T3SS_needle_E
Med13_C
HTH_33
PhyR_sigma-like
DUF134
Motif
Other DBs
NCBI-ProteinID:
ADT99830
UniProt:
E6TDY6
LinkDB
All DBs
Position
3351669..3352523
Genome browser
AA seq
284 aa
AA seq
DB search
MLDTEAVIPVHTQTLSPPARTASPRKRDGYDDVLDMFRELAVLDRDSAAFRRQREAIIAR
CLPLADHIARRFRGRGEGHEDLVQVARVGLLNAVNRFDVDSANDFLAFAVPTMMGEVRRY
FRDHGWSLKVPRRLKELNVRLNAARADLTQELNRAPTPSELAKYLGIDREEVVEGLVAAN
AYSTRSTEQPTTFSGDGEGLSLQDTFGAPDDNIQKVIDVNTVQPLLAALPERDRLVLKLR
FFEDRTQSQIAEQIGVSQMHVSRLLARALATLRDQVGDEPATHS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacacggaagccgtgattccagtgcacacccagactctttcacctcccgcccgc
accgcctccccgcgcaagcgggacggatacgacgacgtcctggacatgttccgcgaactg
gccgtcctcgaccgcgactcagcggcgttccggcggcagcgcgaggccatcatcgcccgc
tgcctccccctggccgatcacatcgcgcgacggttccgaggccgtggcgaaggccacgag
gacctcgtccaggtcgcccgcgtgggactgctgaacgccgtcaaccgattcgacgtcgac
agcgcgaacgatttcctggcgttcgcggtccccaccatgatgggcgaggtccggcgatac
ttccgcgaccacggatggtcgctcaaggtcccgcgacgtctcaaggaactcaatgtgcga
ctcaacgcggcgcgcgccgacctgacccaggagctcaaccgcgcgcccactcccagcgag
ctcgccaagtatctggggatcgaccgcgaagaggtcgtcgaggggctggtggcggccaat
gcgtactccacgcggtcgaccgaacagccgacgacgttcagcggagacggcgagggattg
tcgctgcaggacaccttcggagctcccgatgacaacatccagaaggtcatcgacgtcaac
accgtgcagccactgctggcggcgctgcccgagagggaccgcctcgtgctgaagctgcgc
ttcttcgaggacaggacccagagccagatcgccgagcagatcggtgtctcccagatgcac
gtgtcgaggctgctggcccgcgccctggcgacgctgcgcgatcaggtaggcgacgagccg
gcgacgcactcctga
DBGET
integrated database retrieval system
