Mycolicibacterium gilvum Spyr1: Mspyr1_32660
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Entry
Mspyr1_32660 CDS
T01376
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msp03016
]
Mspyr1_32660
Enzymes [BR:
msp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mspyr1_32660
Transfer RNA biogenesis [BR:
msp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mspyr1_32660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADT99877
UniProt:
E6TEP4
LinkDB
All DBs
Position
3390745..3392019
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AA seq
424 aa
AA seq
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MPEPETAGSAPETPEPTDIEAEPLLTPRDGVPDVSSSRMEIARAADLLASGTGPFAVDAE
RASGFRYSNRAYLVQIRRVGAGTVLIDPVSHGGDPMEVLAPVAAVLSTDEWVLHAADQDL
PCLAEIGMRPTALYDTELAGRLANFDRVNLAAMVQRLLGLQLTKGHGAADWSKRPLPDEW
LNYAALDVEVLTDLREAIAAILDEQGKAEWARQEFEYLRTFEGSPTRRDRWRRTSGIHKV
RDPRALAAVRELWTTRDQIARRRDIAPGRILPDSAIISAATANPDTIEKLTALPVFGGSK
QRRSAQVWLDALARARTNDPPDAQEPSNGPPPASRWSRRKPEAAVRLEAARAELTALAQQ
VSVPVENLLSPETVRRLCWDWQPPADGDATAAVDAFLRESTARQWQRELTVPALSRALSE
PPVS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacccgagaccgccggctccgcgccggaaacacctgaaccgaccgacatcgag
gccgaacctcttctcaccccgcgcgacggggtgccggacgtgtcgtccagccgcatggaa
atcgccagggcggcagaccttctcgcgtcgggtaccggtcccttcgccgtcgatgccgaa
cgcgcgtcgggcttccggtactccaaccgcgcgtatctggtgcagatccgtcgcgtcggg
gcgggaacggtgctcatcgaccctgtcagccacggcggcgacccgatggaggtcctggcc
ccggtggccgcggtcctctccaccgacgagtgggtgctgcacgccgccgaccaggacctg
ccgtgcctggccgagatcggcatgcgccccaccgcgctctacgacaccgaactcgcgggc
cgcctcgccaacttcgaccgggtgaacctcgccgccatggtgcagcgtctgctcggcctg
cagttgaccaagggccacggcgcggccgactggtccaagcggccgctgcccgacgagtgg
ctgaactacgccgccctcgacgtcgaggtgctgaccgatctgcgcgaggcgatcgccgcg
attctcgatgagcagggcaaggccgaatgggcacgccaggagttcgagtacctgcgcacg
ttcgaaggatcccccacccgacgggaccggtggcgccggacctcgggtatccacaaggtg
cgcgacccccgggcattggccgcggtgcgcgaactgtggaccacccgcgaccagatcgcg
cggcgccgcgacatcgcccccggacggatcctgcccgacagcgcgatcatcagcgccgcc
accgccaaccccgacaccatcgaaaagctcacggccctaccggttttcggtggctcgaag
cagcgccgcagcgcccaggtgtggctcgacgcgctcgcgcgcgcccgcaccaacgaccca
cccgacgcgcaggaaccgtccaacggtcccccgccggcgtcgcgctggtcgcggcgcaag
ccggaggcggcggtacgactggaggccgcccgcgccgaattgaccgcgctcgcccaacag
gtgtcggtaccggtcgagaacctgctgtccccggagaccgtgcggcggctgtgctgggac
tggcagccgcccgccgacggcgacgccaccgctgcggtggatgcgttcctgcgcgagtcg
acggccagacagtggcaacgcgagctgaccgtgccggcgttgagccgggcgctgagtgag
cccccggtcagctga
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