Mycolicibacterium gilvum Spyr1: Mspyr1_33720
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Entry
Mspyr1_33720 CDS
T01376
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msp03016
]
Mspyr1_33720
Enzymes [BR:
msp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mspyr1_33720
Transfer RNA biogenesis [BR:
msp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mspyr1_33720
Prokaryotic type
Mspyr1_33720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADT99983
UniProt:
E6TFK7
LinkDB
All DBs
Position
complement(3489676..3490560)
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AA seq
294 aa
AA seq
DB search
MSAEPGLVVVDKPGGMTSHDVVGRCRRLFGTRKVGHAGTLDPMATGVLVVGIERATKILG
LLTATDKSYTATLRLGQTTSTEDAEGELLHQVSAAQVTDEQIERAIAPLRGAIEQVPSAV
SAIKIAGKRAYQMVRDGEQVEIPARPVRIDRFEVLAVRRNGDVVDVDVVVDCSSGTYIRA
LARDVGAALGVGGHLTALRRTRVGGFGLDQARTLEQLADAAELSYSLDEACLHAFPRREL
TAAEVVDAGHGRSLAPAGIDGVYAATAPDGRVMALLEDAGTRTRSVVVIRPATL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgaacccggcctggtcgtcgtcgacaagcccggcggcatgaccagccacgac
gtcgtcggccgctgccggcggctgttcggcacccgcaaggtcggtcacgccggcaccctg
gacccgatggcgaccggtgtgctcgtcgtcggcatcgaacgcgccaccaagatcctcggt
ctgctcactgccaccgacaagtcctatacggcgaccctccggctgggtcagacgacctcc
actgaggacgccgaaggcgaactgctgcaccaggtttcggctgcgcaggtgaccgacgag
cagatcgagcgcgcgatcgcgccgctgcggggggcgatcgagcaggtcccgtcggcggtg
agcgcgatcaagatcgccggcaagcgcgcctatcagatggtgcgagatggcgagcaggtc
gagatccccgcgcgcccggtgcgcatcgaccgcttcgaggtgctcgcggtccggcggaac
ggggacgtcgtggacgtggacgtcgtcgtggactgttccagcggcacctacatccgggcg
ctggcacgcgacgtcggcgcggcgctcggcgtcggaggtcacctgaccgctctgcggcgc
acccgcgtcggcgggttcggcctggaccaggcccgcaccctcgagcaactcgccgacgcc
gccgagctcagctattcgctcgacgaggcgtgcctgcacgcgttcccgcgccgtgagctg
accgccgccgaggtggtcgacgccggtcacggccggtcgctcgcccccgccggcatcgac
ggcgtctacgcggcgacggccccggacggccgcgtgatggctctgttggaagatgcgggg
acgcggacgaggtccgtggtcgtgattcggcccgcgacgctgtag
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