Mycolicibacterium gilvum Spyr1: Mspyr1_39910
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Entry
Mspyr1_39910 CDS
T01376
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03420
Nucleotide excision repair
msp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mspyr1_39910
03430 Mismatch repair
Mspyr1_39910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_39910
Enzymes [BR:
msp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mspyr1_39910
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mspyr1_39910
MMR (mismatch excision repair)
Other MMR factors
Mspyr1_39910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_16
ORC-CDC6-like
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADU00580
UniProt:
E6TNF3
LinkDB
All DBs
Position
complement(4145855..4147978)
Genome browser
AA seq
707 aa
AA seq
DB search
MMVAMSPTASRDRLLGDLDDEQREAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVTAGHV
APGQVLAVTFTQRAAGEMRGRLRALDEGSGTGGVQAQTFHAAARRQLSYFWPRVVGNTEW
QLMDSKFAVVAQAANRGGLPTGTDNVRDLAGEIEWAKASLISPETYADAVAEVSRDIPFD
AAKIATVYANYEALKTRNEGLVLLDFDDLLLHTAAAIENDPAVAQEFRDRYRCFVVDEYQ
DVTPLQQRVLDAWLGNRDDLTVVGDANQTIYSFTGASPRYLLDFSRRFPEVTLVRLERDY
RSTPQVVSLANRVIAGARGRMAGSRLHLVGQRPPGPEPVFKEYPDEVAEAAAVAKSIRTL
IESGTAASEIAVLYRINAQSEVYEEALTEAGVAFQVRGGEGFFSRQEIRQALLALQRVAE
RGAGDTGGSLPEIVRAILEPLGLTAEPPAGTRARDRWEALVALAELVDDEVAQRPHLDLR
ALLTELRQRADSRHPPVVQGVTLASLHAAKGLEWDAVYLVGLADGTLPISHALSHGPDSE
PVEEERRLLYVGVTRARVHLTLSWALARKPGGRQGRRPSRFLTGIAPQSQRDDGPSRSRK
PRGPAPRCRVCNAQLTSPTAIMLRRCESCPSDIDDELLAELKDWRLRISKEMSVPAFVVF
TDNTLIAIAESMPTDDAALVAIPGIGARKLEQYGPDVLALVKGRQKS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgccatgtccccgacggcctcccgcgaccggctgctgggcgacctcgacgac
gagcagcgcgaagccgtgctggcgccgcgcggtccggtgtgcgtgctcgccggagccggc
accggtaagacgcgcaccatcacccgccgcatcgcacacctcgtcaccgcggggcacgtc
gcgcccggtcaggtgctcgcggtgacgttcacccaacgcgccgcgggcgagatgcgaggg
cgcctgcgcgccctcgacgagggatcgggcaccggtggcgtgcaggcgcagacgttccac
gccgccgcgcgccgtcagctgtcgtacttctggccccgggtcgtcggtaacaccgaatgg
cagctgatggacagcaagttcgccgtcgtcgcgcaggccgccaaccgtggcgggctaccg
accggcacggacaacgtccgcgacctcgccggcgagatcgagtgggccaaggcctcgttg
atcagcccggagacctatgccgacgcggtggccgaggtcagccgcgacatcccgttcgac
gcggcgaagatcgccaccgtctacgccaactacgaggcgctcaagacccgtaacgagggt
ctcgtgctcttggacttcgacgacctgctgttgcacaccgccgcggccatcgagaacgac
ccggcggtcgcccaggagttccgggaccggtaccggtgcttcgtcgtcgacgagtaccag
gacgtgacgccgttgcagcagcgcgtcctcgacgcctggctcggcaaccgtgacgacctg
accgtggtcggcgacgcgaaccagaccatctattcgttcaccggcgcctccccgcgctat
ctgctcgacttctcccggcgctttcccgaggtcaccctcgtacggctcgagcgcgactac
cggtcgaccccgcaggtggtctcgctggccaaccgggtcatcgccggggcccgcggtcgc
atggcgggcagcagactgcacctggtcgggcagcgtccaccgggtcccgagccggtgttc
aaggagtatcccgacgaggtcgccgaagccgccgccgtcgccaagagcatccggacgctc
atcgaatccggtaccgccgcatcggaaatcgcggttctctaccgcatcaacgcccagtcg
gaggtctacgaggaggcgctcaccgaagccggagtcgcgttccaggtccgcgggggcgag
ggcttcttcagcaggcaggagatccgccaggccctgctggcgctgcaacgcgtcgccgaa
cgcggcgcgggcgacaccggcggttcgctgcccgagatcgtgcgcgccatcctggaaccg
ctgggactgacggccgaacctccggcgggcactcgtgcccgggaccgctgggaggcgctc
gtcgcgctggccgaattggtcgacgacgaggtcgcccagcgtccgcacctggatctgcgg
gcgcttctcaccgagctgcgtcagcgcgccgattcccgtcatccgccggtggtccagggc
gtcacgctggcgtcgctgcatgcggccaaagggctcgagtgggacgcggtctacctcgtc
gggctcgccgacggcacgttgccgatctcgcatgcgctgtcgcacggacccgacagcgaa
cccgtcgaagaggaacgtcggctgctctacgtcggggtcacccgggctcgcgtgcatctg
acgctgagctgggcgctggcccgtaaaccgggcggccggcagggcagacgcccgtcacgg
ttcctcaccgggatcgctccgcagtcgcagcgcgacgacggtcccagtcgctcccgcaag
ccgcgcgggccggcgccgcgatgccgggtctgcaacgcgcagttgacgtctccgacggcg
atcatgctgcgacggtgtgagagctgcccgtccgacatcgacgacgagttgctcgccgag
ctcaaggactggcggttgcgaatctccaaggagatgagcgtgccggccttcgtggtgttc
accgacaacaccctgatcgcgatcgccgaatccatgccgaccgacgatgcggcactggtg
gcgatcccgggcatcggcgcccgcaagctcgaacagtacggacccgacgtcctggcactg
gtcaaaggccgccagaaatcgtaa
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