Mycolicibacterium gilvum Spyr1: Mspyr1_42560
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Entry
Mspyr1_42560 CDS
T01376
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp00020
Citrate cycle (TCA cycle)
msp00190
Oxidative phosphorylation
msp00650
Butanoate metabolism
msp00720
Other carbon fixation pathways
msp01100
Metabolic pathways
msp01110
Biosynthesis of secondary metabolites
msp01120
Microbial metabolism in diverse environments
msp01200
Carbon metabolism
Module
msp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
msp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
msp_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Mspyr1_42560
00650 Butanoate metabolism
Mspyr1_42560
09102 Energy metabolism
00190 Oxidative phosphorylation
Mspyr1_42560
00720 Other carbon fixation pathways
Mspyr1_42560
Enzymes [BR:
msp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Mspyr1_42560
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADU00817
UniProt:
E6TCJ1
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All DBs
Position
4410649..4412403
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AA seq
584 aa
AA seq
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MIVEHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEE
DNWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGMPFNRTPEGRIDQRRFGGH
TRDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDITMTETPSGPVATG
VVAYELATGDIHVFHAKAIVFATGGSGRMYKTTSNAHTLTGDGLGIIFRKGLPLEDMEFH
QFHPTGLAGLGILISEAVRGEGGRLLNGDGERFMERYAPTIVDLAPRDIVARSMVLEVLE
GRGAGPNKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVKELVPVYPTCHYVMGGI
PTTVNGQVLSDNTTVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAANYAL
GHDFVELPESPAEMVVGWVGDILSEHGNERVADIRGALQQSMDNNAAVFRTEETLKQALT
DIHALKERYSRITVQDKGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDY
PNRDDTNYMRHTMAYKEGSDLLSDIRLDYKPVVMTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgaacaccgctacgacgtcgtgatcgtcggcgcaggtggcgcgggcatgcgt
gccgccgtggaggccggaccccgcgtccgcaccgcggtgctgaccaagctgtacccgacc
cggtcgcacaccggcgcggcccagggcggcatgtgcgccgcgctggccaacgtcgaagag
gacaactgggagtggcacaccttcgacaccgtcaagggcggcgactacctcgccgaccag
gacgccgtggagatcatggccaaagaggccatcgacgcggtgctcgacctggagaagatg
gggatgccgttcaaccgcacccccgagggacgcatcgaccagcgccggttcggcgggcac
acccgcgaccacggcaaggcccccgtgcgccgcgcgtgctacgccgccgaccgcaccgga
cacatgatcctgcagacgctgtaccagaactgcgtcaagcacgacgtcgagttcttcaac
gagttctacgcgctcgacatcacgatgaccgagaccccgtccgggccggtcgcgaccggt
gtcgtcgcctatgagttggcgaccggggacattcatgtcttccacgccaaggccatcgtg
ttcgccaccggtggatccggccggatgtacaagaccacgtcgaacgcgcacacgctgacc
ggcgacggcctgggcatcatcttccgcaagggacttcccctggaggacatggagttccac
cagttccacccgacaggtctggccgggctgggcattctgatctccgaggccgtgcgcggc
gagggcggtcgtctgctcaacggcgacggcgagcgcttcatggagcgctacgccccgacg
atcgtcgacctcgcgccgcgtgacatcgtcgcgcgctcgatggtgctggaggtgctcgag
ggccgcggcgccggaccgaacaaggactacgtctacatcgacgtgcgccacctcggcgag
gacgtgctggaggccaagcttcccgacatcaccgagttcgcccgcacctatctcggcgtg
gaccccgtcaaggaactcgtgcccgtctacccgacatgccactacgtcatgggcggcatc
ccgacgacggtcaacggccaggtgctctcggacaacaccaccgtggtgccgggcctctac
gccgccggcgagtgcgcgtgcgtgtcggtgcacggagccaaccggctgggcaccaactcg
ctgctcgacatcaacgtcttcggccgtcgcgccggcatcgccgccgcgaactacgcactg
ggacatgacttcgtcgagctgccggagagccccgccgagatggtggtcggctgggtcggc
gacatcctttccgagcacggcaacgagcgcgtcgccgacatccggggcgcactgcagcag
tcgatggacaacaacgccgcggtgttccgcaccgaggagacgctgaagcaggcgctgacc
gacatccacgcactcaaggagcgctactcgcgaatcacggtgcaggacaagggcaagcga
tacaacagcgacctgctcgaggccatcgagctgggcttcctgctcgagctcgccgaggtc
accgtcgtcggtgcgttgaaccgcaaggagtctcgcggcggacatgcccgcgaggactac
ccgaaccgcgacgacaccaactacatgcgccacaccatggcctacaaagaaggttcggac
cttctgagtgacatccgcctggattacaaacccgtcgtgatgacgcgttacgagccgatg
gaacggaagtactga
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