Mycolicibacterium gilvum Spyr1: Mspyr1_43870
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Entry
Mspyr1_43870 CDS
T01376
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mspyr1_43870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msp03021
]
Mspyr1_43870
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_43870
Enzymes [BR:
msp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mspyr1_43870
Transcription machinery [BR:
msp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mspyr1_43870
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mspyr1_43870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF6327
Motif
Other DBs
NCBI-ProteinID:
ADU00943
UniProt:
E6TE34
LinkDB
All DBs
Position
complement(4548371..4549435)
Genome browser
AA seq
354 aa
AA seq
DB search
MLISQRPTLSEEVVAENRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVELFGLARELNIEAEGIEIGPSPAE
ADQAAHFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPASFDPSEVAGYDVATGTWNSDAGYDSGYEADDNQDYAETEQL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgccccaccctgagcgaagaggtcgttgccgagaaccggtcgcag
ttcgtcatcgaaccgctggagcccggattcggctacaccctcggaaactcgctgcgccgc
acgctgctgtcgtccatcccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtccccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggaccgggtgaggtcaccgccggtgacatcgtgccgccggccggcgtcaccgtgcacaac
ccggacatgcacatcgccaccctgaacgacaagggcaagctcgaggtcgagctggtcgtc
gagcggggccgcggctacgtgccggccgtgcagaacaaggcctccggcgccgagatcggc
cgcatcccggtcgattccatctactcgccggtcctcaaggtcacctacaaggtggaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tccatcagcccgcgcgacgcgctggcctcggccggcaagacgctggtcgaattgttcggt
ctggcacgggaactcaacatcgaagccgagggcatcgagatcggcccgtcgcccgccgaa
gccgatcaggccgcgcacttcgcgctgccgatcgacgatctggacctcactgtgcggtcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctcgtcgcccgcacggag
tccgatctgctggacatccgcaacttcggccagaagtccatcgacgaggtcaagatcaag
ctgcaccagctcggactgtcgctcaaggacagcccggccagcttcgatccgtccgaggtc
gccggctacgacgtcgcgaccggaacctggaacagcgatgccggttacgactccggttat
gaggctgacgacaaccaggattacgccgaaaccgaacagctctaa
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