Mycobacterium spongiae: F6B93_03925
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Entry
F6B93_03925 CDS
T07689
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mspg
Mycobacterium spongiae
Pathway
mspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F6B93_03925 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mspg03400
]
F6B93_03925 (recB)
Enzymes [BR:
mspg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F6B93_03925 (recB)
DNA repair and recombination proteins [BR:
mspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F6B93_03925 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
HTH_32
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QUR66348
UniProt:
A0A975JVW5
LinkDB
All DBs
Position
complement(1000104..1003397)
Genome browser
AA seq
1097 aa
AA seq
DB search
MDHFDLLGPLPASGSTTVLEASAGTGKTFALAGLVTRFVAEGVTPLDEMLLITFSKAASR
ELRERVRAQLVNTVAALDGSVPGLPNDLVAHLQRGTAAERDERCARLRTALADFDTATIC
TTHQFCQLVLKSLGVAGDTDAGATLVESLDDVVAQIVDDLYLTHFGAERDEVALSRSGAL
NLARAVVADPCAELRPHHPDPQSVAAVRLRFATDVLVQLELRKRQLGIFSYNDLLSRLAE
TLEGATDSTAAHAAGRMRRRWTTVMVDEFQDTDPIQWRVIDRAFNGHCRLVLIGDPKQAI
YGFRGGDIYTYLGAARTAGDRRTLGVNWRSDKALVDSLHAVLLGAELGDPDIVVRDVEAR
VGGHRLRNAPRNAPFRLRVVNRAGFGHDQTRTIPIDQLRRYISTDLATDIGALLASDATF
DAKPIRAADIAVIVESSKDARPCQVALTEAGIPAVYTGDGDVFAADAAKDWLCLLNAFDQ
THRSGLVRAAATTVFFGKTANELACGGDALTDDVSTTLRNWAAQLRERGPAAVFEAAQLA
GMGRRVLAERGGERTMTDVAHIAQLLHTITHRERLTLPALRDWLRRQCDDRGGAPERTRR
IDSDAAAVQILTVWGAKGLQFPVVYLPFAFNRHVFIDDIPLYHDSNGVRCLDIGGPGSAD
RKSIEAFSRAEAARNDIRLTYVALTRAQSQVVAWWAPAKDEPTGGLSRLLRGRRRGAAEV
PNSCVPRTISDDEALDQFRAWEAAGGPAIEESAPAAVAPVPRPPPPAELAVRHFHRSIDT
TWRRTSYSALVRGAHDAAVSSEPEITARDDEAEEVAVSTAPEIGPDTTSPMADLPAGATF
GSLVHAVLEHADPFAVDLEAELGRQVLDHSRLWPVDVEPTALASALVPMHDTPLGPLADE
LTLRRIGHRDRLRELTFELPLAGGDVAEAIAPPRVADLGALLRDYLPPEDPLARYAGRLM
SEDLGAQPLHGYLSGSIDVVLRVPQQRYLVVDYKTNMLGDTAADYSFPRLTDAMLHSDYP
LQALLYTVVLHRFLRWRQPDYQPRRHLGGVLYLFVRGMCGASTPRVDGHPCGVFSWLPPA
EMVVRLSDMLDQGRRAT
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaccacttcgatctcctgggtccgttgcccgcaagcgggtccacgacggtgttggaa
gccagtgccggtacgggcaagacattcgccctggccgggctggtcacccggttcgtcgcc
gaaggcgtcaccccactcgacgaaatgttgctgatcaccttcagcaaagcggccagccgg
gaactgcgggaacgggtccgtgcccagctggtgaacaccgtagccgcacttgatggttcg
gtacccgggttaccgaatgacctcgttgcgcacctgcaacgcggcaccgctgccgaacgc
gacgagcgttgcgcacggctgcgcactgcgctcgccgacttcgataccgcgaccatctgc
accacgcaccagttctgccagcttgtcctcaaatctcttggagtagctggcgatacggat
gccggtgcgacactggtcgaaagcctcgacgacgtggtcgcgcagattgtcgatgatttg
taccttactcacttcggagcggaacgtgacgaggtagcgctcagccgctcgggcgcactg
aacctggctcgcgcggtggtcgctgacccgtgtgccgagttgcgcccgcaccacccggac
ccgcagtcggtcgccgcggtgcggttgcgcttcgccacggatgtgctcgtacaactcgaa
ctgcgcaagcgccagctcggcatcttcagctacaacgacctgctcagccggctagccgag
accctcgaaggcgccactgactcgacggcagcccacgccgccggccgcatgcgcaggcgc
tggacgacggtcatggtcgacgagtttcaggacaccgacccgattcagtggcgcgtcatc
gaccgcgccttcaacggccactgcaggctggtgctgatcggcgatcccaagcaggcgatc
tacggctttcgcggcggcgacatctacacctacctgggggcggcccgtaccgccggtgac
cgtcgcacgctcggcgtgaactggcgtagcgacaaagcgctcgtcgacagcctgcacgcg
gtcctgttgggagccgagcttggcgaccccgacatcgtcgtccgcgatgtcgaggctcgg
gttggcggccatcggttgcggaacgcgccgcgcaacgcaccgtttcgcctgcgggtcgtc
aaccgcgccgggttcggccacgaccagacccggaccatcccgatcgaccagctacgccgc
tacatttcgaccgacctcgcgaccgatatcggtgcgctactagccagcgacgcaaccttt
gacgcgaagccgatccgcgcggcagacatcgcggtcattgtcgaatcaagcaaagacgcc
cggccctgccaagtcgcattgaccgaagccggcattcccgctgtgtacaccggtgacggc
gacgtctttgccgccgacgccgccaaggactggctgtgcctgctgaacgccttcgaccag
acacaccgcagcgggctggtacgggccgcggcaaccaccgtgttcttcggcaagacggcc
aacgagcttgcctgcggcggcgacgccttgaccgacgatgtatccaccacgctgcggaac
tgggccgcccaactgcgcgagcgcggtccggccgccgtcttcgaggcagcacaattggcc
ggaatggggcgacgcgtgcttgccgaacgcggcggcgagcggacgatgaccgacgtggcc
catatcgcccaactcctgcacaccatcacccaccgcgagcggctgactttgccggcgttg
cgcgattggctgcgccgccagtgcgatgatcgcggcggagcacccgaacgcacccggcga
atcgacagtgacgccgcggcggtacagatcctgacggtatggggcgccaaggggctgcag
tttccggtcgtgtacttgccgttcgccttcaaccggcacgttttcatcgacgatattccg
ctctaccacgacagcaacggcgttcggtgcctggatatcggcggcccaggtagtgccgat
cgcaagagcatcgaagccttcagccgagccgaagcggcccgcaacgatattcggctgaca
tatgtcgcgctgacgcgagcgcagtcacaagtcgtggcatggtgggcgcccgccaaggac
gaaccgaccggtggcctgtcacgcctgctacgcgggcggcgccgcggcgctgccgaagtg
ccgaacagctgcgtaccgagaacgatctcggacgatgaggcgttggaccagtttcgggcg
tgggaggcggctggcggcccagcgatcgaagaatccgcgccagcggccgttgcgcccgtt
ccgcggccgccgccaccggccgagctggccgtacgccattttcaccggtcgatcgacacc
acgtggcggcgcacgtcgtattcggcactggtccgcggcgcgcacgatgcggcagtcagc
agtgaaccggagatcactgctcgcgacgacgaggccgaagaggtggcggtctcgaccgcg
ccggagatcgggccggacaccacttcccccatggccgacctaccggccggtgcaacattc
ggttcgctggtgcatgccgtacttgaacatgccgacccctttgccgttgacctggaggct
gagctgggacgtcaggtcctcgatcattcgcggttgtggcccgtcgacgtggaaccgacc
gcactcgcgtccgcacttgtgcccatgcacgacacgcccttgggcccgttggccgacgag
ctgacgttgcgccggatcggacatcgggatcgactgcgggagttgacctttgaactaccg
ctggccggcggcgacgtcgcggaggcgattgcgcccccacgagtcgccgacctgggtgcg
ctgcttcgcgattacctgccacccgaggatccgctcgcccgctatgccggccggctgatg
tctgaggatctcggcgcccagccgttgcatggctatctgtctgggtcgatcgacgttgtg
ctgcgggtgccgcaacagcgttatctggtcgtcgactacaagaccaacatgctcggcgac
actgctgccgattacagctttccacggttgaccgacgcgatgctgcattccgattaccca
ttacaggcacttctgtataccgttgtgctgcatcgctttttacgatggcggcaacctgac
taccagccgcggcgtcacctgggtggggtgttgtacttgtttgtgcggggaatgtgcggg
gcgtcgaccccacgagtcgatgggcatccttgcggagtattcagctggctgccgcccgcc
gagatggttgtgaggctatctgacatgctcgaccagggtcggcgtgcgacgtga
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