Mycobacterium spongiae: F6B93_04135
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Entry
F6B93_04135 CDS
T07689
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mspg
Mycobacterium spongiae
Pathway
mspg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F6B93_04135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mspg03021
]
F6B93_04135
03400 DNA repair and recombination proteins [BR:
mspg03400
]
F6B93_04135
Enzymes [BR:
mspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F6B93_04135
Transcription machinery [BR:
mspg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F6B93_04135
DNA repair and recombination proteins [BR:
mspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F6B93_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QUR66382
UniProt:
A0A975JVC7
LinkDB
All DBs
Position
1043284..1046817
Genome browser
AA seq
1177 aa
AA seq
DB search
MADFRQSKTDASPDRSRPQSSSNGSVAGAPNRVSFAKLREPLEVPGLLDVQIDSFEWLVG
SEEWRESASARGNAKPVGGLEEVLVELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKD
MTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVY
FDETIDKSTEKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSE
QITERFGFSPIMLSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRY
DLARVGRYKVNKKLGLHAGEPITSSTLTEEDVVATIEYLVRLHHASQDGQPATMTVPGGV
EVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIR
PVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYG
RMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIHYLTADEEDRHVV
AQANSPIDNDGRFVERRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDD
ANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEDSGVIEEVSADYITVM
ADDGTRRTYRMRKFARSNHGTCANQSPIVDAGERVEAGQVIADGPCTQDGEMALGKNLLV
AIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVL
ADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPH
GESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPV
EDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDTASGVPDWAARLPE
DLLAADPNAIVSTPVFDGAQETELQGLLSCTLPNRDNDVLVDGDGKAVLFDGRSGEPFPY
PVTVGFMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGA
AYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSD
GAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttggctgatttccgccagagcaagacagacgctagtcccgatcggagtcgcccgcaaagt
tcctcgaatggctcggtagccggagcgccaaaccgagtttccttcgccaagctgcgcgaa
ccgctggaggttcccggtctgcttgatgtgcagatcgattcgttcgagtggctggtcggc
tccgaggagtggcgcgaatctgcgtcggcccgcggcaatgccaaaccggtaggtggcctc
gaagaggtacttgtcgagctgtcgccgatcgaggacttctccgggtccatgtcgctgtcg
ttctccgacccccggttcgacgaggtgaaggcgcccgtcgacgagtgcaaagacaaggac
atgacgtacgcggcgccgctgttcgtcaccgccgagttcatcaacaacaacaccggtgag
atcaagagccagacggtgttcatgggcgacttcccgatgatgaccgagaagggcacgttc
atcatcaacggcaccgagcgcgtggtcgtcagccagctggtgcgatcgcccggtgtgtac
ttcgacgagaccatcgacaagtccaccgagaagacgctgcacagcgtcaaggtgatccca
agtcgcggtgcctggctcgaattcgacgtcgataagcgcgacacagtaggcgtgcgcatc
gaccgcaagcgtcggcagccggtcaccgtgctgctcaaggcgttgggctggaccagcgag
cagatcaccgagcggttcgggttctccccgatcatgttgtcgacgctggagaaggacaac
accgtcggcaccgacgaagcgctgctggacatctaccgcaagttgcggccgggcgaaccg
ccgaccaaggagtccgcgcagacgctgctggagaacctcttcttcaaggagaagcgctac
gacttggcccgcgttggccgttacaaggtcaacaagaagctcgggttgcacgccggtgag
ccgatcacgtcgtccacgctgaccgaagaggacgtcgtggcgaccatcgaatacctcgtt
cgcctgcaccacgcatctcaagatggtcagccagccacgatgactgtgccgggtggtgtc
gaggtgccagtggaaaccgacgacattgaccacttcggcaatcgccggctgcgcacggtc
ggcgagctgatccagaaccagatcagggtgggcatgtcccggatggagcgggtggtccgg
gaacggatgaccacccaggacgtcgaggccatcaccccgcagacgctgatcaacattcgg
ccggtcgtcgccgcaatcaaggagttcttcggcaccagccagctgtcccaattcatggac
cagaacaatccgctgtcggggctgacccacaagcgtcgactgtctgcgctgggtccgggc
ggcctgtcgcgtgagcgcgcaggcctggaggtccgcgacgtgcacccgtcgcactacggc
cggatgtgcccgatcgaaactccggagggtccgaacatcggtctgatcggttcgttgtcg
gtctatgcgcgcgtcaacccgttcgggtttattgagacgccgtaccgcaaagtggtcgac
ggtgtggtttccgatgagatccactacctgaccgctgacgaggaagaccgccacgtcgtg
gcacaggccaactcgccgatcgacaatgacggccgcttcgttgagcggcgtgtcctggtc
cgccgcaaggcgggcgaggtggaatacgtgccctcctccgaagtggattacatggacgtc
tcaccgcgtcagatggtgtcggtggcaaccgcgatgatccccttcctcgagcacgacgac
gccaaccgtgcgctgatgggcgccaacatgcagcgtcaggcggttccgctggtgcgtagc
gaggcgccgctggtcggcacgggcatggaactgcgcgcggcgatcgacgccggcgacgtt
gtcgtggcagaggacagcggcgtcattgaggaggtgtcggccgactacatcacggtcatg
gccgatgacggcacccggcggacctaccggatgcggaagttcgcccgctccaaccacgga
acgtgtgccaaccaaagcccgatcgtcgacgctggcgagcgggtcgaggctggtcaggtg
attgccgacggtccgtgtacccaggacggtgagatggcactgggtaagaacctgctcgtg
gcgatcatgccctgggagggtcacaactacgaggacgccatcatcttgtccaaccgtctc
gtcgaagaggatgtccttacctcgatccacatcgaggagcacgagatcgacgcgcgcgac
accaagctcggcgccgaggagatcacccgggacatcccgaacgtctccgacgaggtcctg
gccgacctggacgagcgcggcatcgtgcgcatcggcgcggaggttcgcgacggcgacatc
ctggtcggcaaggtcaccccgaagggggagacggaactgacgcccgaggagcggctgttg
cgcgcgatcttcggtgagaaggcccgcgaagtccgcgacacctcactcaaggtgccccac
ggtgaatccggcaaggtgatcggcattcgggtgttctcgcgcgaggacgatgacgaattg
ccggctggtgtcaacgagctggtgcgtgtttacgtcgcccagaagcgcaagatctcagac
ggtgacaagctggccggtcgacacggcaacaagggcgtcatcggcaagatcctgccggtc
gaggacatgccgttcctcccggacggcacccccgtggacatcatcttgaacacccacggt
gtgccgcgacggatgaacatcggccagatcctggaaacacacctcggctggtgtgcccac
agtgggtggaaggtcgacaccgccagcggggtaccggactgggccgcacggctgcccgag
gatctgctcgcggcggacccgaacgccatcgtgtcgacgccggtgttcgacggcgcacag
gagaccgagttgcagggtttgctgtcgtgcacgttgcccaaccgggacaatgacgtgttg
gtggacggcgacggcaaggccgtattgttcgacggccgcagcggcgaaccgttcccgtac
ccggtgacggttggcttcatgtacatcatgaagctgcaccacttggtggacgacaagatc
catgcccgttctaccggcccgtactcgatgatcactcagcagccgttgggtggtaaggcc
caattcggtggtcagcggttcggcgagatggagtgttgggcgatgcaggcctacggtgcc
gcctacacactgcaggagctgctgaccatcaagtccgacgacacggttggccgcgtcaag
gtgtacgaggcgatcgtcaagggcgagaacatcccggagcccggcattcccgagtcgttc
aaagtgctcctcaaggagctgcagtcgctgtgcctcaacgttgaggtgctctcgtccgac
ggcgcggcgattgaacttcgcgagggtgaggatgaggacctggagcgggccgcggcgaac
ctagggatcaatttgtcccgcaacgaatccgcttctgttgaggacttggcttag
DBGET
integrated database retrieval system
