KEGG   Mycobacterium spongiae: F6B93_05310
Entry
F6B93_05310       CDS       T07689                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mspg  Mycobacterium spongiae
Brite
KEGG Orthology (KO) [BR:mspg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mspg03400]
    F6B93_05310
Enzymes [BR:mspg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F6B93_05310
    5.6.2.6  RNA 3'-5' helicase
     F6B93_05310
DNA repair and recombination proteins [BR:mspg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F6B93_05310
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr DEAD WHD_2nd_Lhr WHD_3rd_Lhr Helicase_C ResIII PhoH DUF6406 AAA_25 AAA_22 Cas3-like_C_2
Other DBs
NCBI-ProteinID: QUR69606
UniProt: A0A975K1E6
LinkDB
Position
complement(1297541..1302145)
AA seq 1534 aa
MDRFSAVTRAWFESTFAAPTTAQASAWAAIAEGDNTLVIAPTGSGKTLAAFLWALDGLAR
SAEPNSGTHVLYVSPLKALAVDIERNLRTPLAGLTRLAERQGLPAPDIRVGVRSGDTPPA
LRRQLIARPPDVLITTPESLFLMLTSAARETLATVRTVIVDEIHAIAATKRGAHLALSLE
RLDDLNQDQSQRRPAQRIGLSATVRPPEELARFLSGQAPTTIVAPPSSKTVELTVQVPVP
DMANLANNTIWPDVEARLADLIESHNSTIVFANSRRLAERLTSRLNEIHAERCGIEPTGE
PNGQVAGGAPAHIIGSIQDSQALGAPPVLARAHHGSVSKEQRALVEEDLKRGQLKAVVAT
SSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGEISRGVLFPKHRTDLLGCAVS
VQRMLSGQIETMQVPANPLDILAQHTVAAAALEPLDADRWFDTVRRSAPFATLPRSAFEA
TLDLLSGKYPSTEFAELRPRLVYDRDGDLGGTLTARPGAQRLAVTSGGAIPDRGLFTVYL
ASTANDSEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLP
FWRGDDVGRPAELGAALGAFTGELARLDRGRFGKRCADLGFDDNATANLWELLAEQRTAT
RVVPTDTSLLVERFRDELGDWRVILHSPYGLRVHGPLALAVSRRLRERYDIDEKPTASDD
GIVVRLPDSGQPPPGAELFIFEADEIDPIVTAEVGGSALFASRFRESAARALLLPRRHPG
RRSPLWHQRQRAAQLLDVARKYPDFPIVLETVRECLQDVYDVPTLVALMTDIAQRRVRVT
EAETATPSPFAASLLFGYVGAFIYEGDIPLAERRAAALSLDSTLLAELLGRVELRELLDP
EVIATTGRQLQHLSADRLAPDAEGVADLLRLLGPLTEDEVAARTAVSDGGDVTGWLEGLR
AARRALTVSFADHIWWVAVEDIGRLRDGVGSAVPVGVPTSFTEAVADPLGELLGRYARTR
TPFTTAEAAGRFGLGLRVTADVLGRLANDGRLVRGDFVAVPETPSAAGGEQWCDAEVLRI
LRRRSLAALRAQVEPVSTAAYGRFLPAWHGVAAATSSAHTANTGNTGIDGLAAAIEQLAG
VRMPASAIEPLVLAPRVRDYSPAMLDELLASGEVTWSGAGSISGSDGWIALHPADAAPVT
LTAPAEIEFTDVHRTIVDTLAGGGAYFFRQLTQHDVAEAELKAALWELIWAGLITGDTFA
PVRALLGGTGSRTRSAPAHRGPRRPRLSRYSVAHAQTRRTDPMVAGRWSALPLAEPDSTL
RAHHHAEVLLNRHGVLTKGAVAAEGVPGGFATLYKVLGAFEEAGRCQRGYFVESLGGAQF
AVASTVDRLRSYLDGPGSFKDPERPEYQAVTLAAADPANPYGAALPWPASRGGGTARPGR
KAGALVVLVDGELAWFLERGGRSLLTFTEDPGAGHAAAIGLADLVAARRVASIVVERIDG
TPVLAPDTTASVTDTAASLIQAGFVRTPRGLRLR
NT seq 4605 nt   +upstreamnt  +downstreamnt
ttggatcgcttcagcgcagtcacccgcgcctggttcgaaagcaccttcgccgcgccgacc
accgcgcaggccagcgcgtgggcggccatcgccgagggcgacaacacactggttatcgcg
ccgaccggttcgggcaagacgctggccgcattcctttgggctctcgacggcctggccaga
tcggccgaaccgaactcgggcacccacgtgctgtacgtgtcgccgctcaaagcgctggcc
gtcgatatcgagcgcaacctacgcaccccgctagcggggctcacccggctcgccgagcgc
cagggcctgccggcacccgacattcgcgtgggcgtgcgctcgggcgataccccgccagca
ctgcggcgccagctcatcgctcggccacctgacgtattgataaccaccccggagtcgtta
tttctgatgctgacctccgcggcgcgcgagaccttggctaccgtgcggacagtcatcgtc
gatgagattcacgcgatcgcggccaccaaacgcggcgcacacctggcgctgtcgctggag
cggctcgatgacctcaaccaggaccagtctcaacggcggcccgcccagcgcatcgggctg
tcggcaacggtgcgtccgcccgaggagctggcgcggttcttgtcgggccaagccccgacg
accatcgtggctcccccctcgtccaagaccgtcgagctgaccgtgcaggtgccggtgccc
gacatggccaacttggccaacaacaccatctggcccgatgtcgaggcgcggcttgccgac
ctgatcgaatcgcacaattcgaccatcgtgttcgccaattcccggcggctggccgagcgg
ctgacctcccggctcaacgaaatccatgcggaacgttgcggaatcgagcccactggcgag
cccaacgggcaggtggccggcggagcgccggcgcacatcatcggctccatccaggacagc
caggctctcggcgcgccgcccgtgctggcgcgtgcccaccacggctcggtcagcaaagag
cagcgcgccctggtcgaagaggacctcaaacgcggccagctcaaggcggtcgtcgcgacg
tccagcctcgagctcggcatcgatatgggcgccgtcgatctcgtgatccaggtggaggca
ccgccatcggtggccagcggcctgcagcgcatcggccgggccggacaccaggtcggggag
atctcgcgtggggtgctgttccccaagcaccgcaccgaccttctcggttgtgcggtgagt
gtgcaacggatgctctcgggccagatcgaaaccatgcaggtccccgcgaacccgctcgat
atcctcgcgcaacacacggtggccgcggccgcgctggaaccgctggacgccgatcggtgg
ttcgacaccgtgcgccgcagcgccccgttcgccacactgccgcgcagcgcattcgaagcc
accctcgatctgctgtccggcaaatacccgtccaccgaattcgccgagctgcggccgcgg
ctggtttacgaccgcgacggtgacctcgggggaacgctcaccgcgcgaccgggtgcgcag
cggcttgccgtcacttccggcggtgccatccccgaccggggactgttcacagtctatctg
gcttccaccgctaacgactccgaaaaaccttcgcgggtaggcgaactcgacgaagagatg
gtctatgagtcccgcccgggcgacgtgatctcgctgggtgccacgagctggcggattacc
gagatcacccacgaccgggtgctggtgatccccgcgccagggcagccagcacggttgccg
ttctggcgcggcgacgatgtcggccggcccgccgaactcggtgccgccctcggcgccttt
accggtgagctggcccgtttggaccgcgggagattcggcaagcgttgcgcggatttgggt
ttcgacgacaacgcgaccgccaacctgtgggagctgctggctgaacaacggaccgccacc
cgggtggtacccactgacaccagcttgctcgtagaacggttccgcgacgagctcggcgat
tggcgggtgatcttgcactcgccgtacgggcttcgggtgcacggaccactggcactggcg
gtcagcaggcggctgcgcgagcgctacgacatcgacgagaaaccgaccgcctccgacgac
gggatcgtggtgcgcttgcccgactccgggcagcccccgcctggcgcggagttgttcatc
ttcgaggccgacgagatcgatccgatcgtcaccgcggaagtgggcggctcggcgttgttc
gcctcgcggttccgtgaatcggcggcgcgcgccttgctgctgccacgccgacaccctggc
cgccgctcgccgctgtggcaccagcgccagcgcgccgcccaattgctcgacgtggcccgc
aagtaccccgacttccccatcgtgctggagactgtccgcgagtgcctccaggacgtctac
gatgtccccacgctggtggcgctgatgaccgacatcgcccagcgccgggtgcgggtcacc
gaagccgagaccgcgacaccctcaccgttcgcggcgtcactgttgttcggctacgtgggt
gcgttcatctacgaaggtgatatcccgctggccgaacgccgcgccgccgcgctctcgctc
gacagcacgctgctggccgagctgcttggccgtgtggagctgcgcgaactgctcgatccc
gaggtgatcgcgacaaccggccgccagttgcagcatctgtcggctgatcggctcgctccc
gatgccgaaggagttgccgacctattgcgactgctgggtcccctcaccgaggatgaggtc
gccgctcggacagcggtgtccgatggcggcgacgtcacggggtggttggagggactgcgt
gccgccagacgggcactgaccgtgtccttcgccgatcacatctggtgggtggccgtcgaa
gatatcggccgcctccgcgacggagtcgggagcgcggtgccggtcggcgtcccgaccagc
ttcacggaggcggtggccgatccactgggcgagctgctgggccgctacgcgcgcacccgt
accccgttcactaccgccgaggccgccggccggttcggtctgggcctacgggtcaccgcg
gacgtgctcgggcgcttggccaacgacggccgactggtgcgcggcgactttgtcgccgtg
cccgagacaccgagcgccgccggcggtgaacagtggtgcgatgcggaggtattgcgcatt
ctgcgccgccgctcgctggccgcgctccgggcgcaggttgaaccggtcagcaccgcggcc
tacggccgattcctgccggcctggcacggggtcgccgccgccacctcgtcagcgcatact
gccaacacgggcaacacaggcatcgatggcctggccgccgccatcgaacagctcgcgggc
gtccggatgccagcctcggctattgagccgctggtgctcgccccacgggtccgcgactac
tctccggcgatgctggacgagctgctcgcgagcggagaggtcacgtggtcgggcgccgga
tcgatctcgggcagcgatggttggatcgcgctgcaccccgccgatgcggcgccggtgacc
ttgaccgctccggcggagatcgagttcaccgatgtccaccggacgatcgtggacacgctg
gccggcggcggcgcgtacttcttccgtcagctgacacagcacgacgtcgccgaggcggag
ctcaaagcagctctgtgggaactgatctgggccggcttgatcaccggcgacacgtttgca
ccagtgcgcgcgctactgggcggcacaggttctcgtacccgctccgccccggcgcaccgg
ggaccccgccgcccgcggttgagccggtacagcgtcgcacacgcacagacccgcaggact
gacccgatggtggccggtcgctggtcggcgttgccactcgccgagcccgattccacgctg
cgggcacatcaccacgccgaggtgctgttgaatcgccacggtgtgctgaccaaaggcgcg
gtggccgccgagggcgtcccgggcgggttcgccacgctctacaaggtgctgggcgcgttc
gaggaagccggcaggtgccagcgcggctacttcgtcgaatcgctgggaggcgcccagttc
gccgtcgcgtcgaccgtcgaccggctccgcagctatctcgacggcccgggttcgttcaag
gacccggaacggcccgagtaccaggcggttactctcgcagccgccgacccggccaacccg
tacggtgcggcgctgccctggccggcgtcgcgtggtggcggcaccgcccgacccggtcgc
aaagccggagcactcgtcgtcctggtggatggcgagctggcctggtttctcgagcgagga
gggcgttccttgctgacattcaccgaagaccctggcgcggggcacgcggctgccatcggg
ctggctgacctcgtcgccgctcgccgcgtcgcgtcaatcgtcgtcgagcggatagatggg
acgccggtgcttgcgcccgacacgacagcctcggtgaccgacacggcggcgagcctcatt
caagccggcttcgtccgcacgccccgcgggttgcggctgcggtaa

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