Mycobacterium spongiae: F6B93_08285
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Entry
F6B93_08285 CDS
T07689
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mspg
Mycobacterium spongiae
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mspg03016
]
F6B93_08285
Enzymes [BR:
mspg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F6B93_08285
Transfer RNA biogenesis [BR:
mspg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F6B93_08285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QUR67099
UniProt:
A0A975JXW1
LinkDB
All DBs
Position
complement(2008131..2009447)
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AA seq
438 aa
AA seq
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MSPELSPEAAASPASAEPDPTPLLHPANGVPDLAVTASQIEAAAALLGRGNGPFAVDAER
ASGFRYSNRAYLIQIRRAEAGTVLIDPVSHGEDPLTVLRPVADVLSQDEWILHAADQDLP
CLDEVGMRPPALYDTELAGRLAGFDRVNLAAMVQRLLGLGLAKGHGAADWSKRPLPSAWL
NYAALDVEVLIELRAAISEVLSQHGKTDWAAQEFEHLRNADTRTGTPAVRRDRWRRTSGI
HRVHDRRGLAAVRELWLARDRVAQRRDIAPRRILPDSAIIEAAVADPKSMDDLIALPVFG
GRNQRRSASMWLAALEAARQNHDPPEIAEPANGPPPAARWGRRKPDAATRLGAARTALAE
VSQRVEVPTENLVAPELVRRLCWDWAEPGDPVETVHEVLRAGQARAWQRELVVPVLAAAL
TQAGTADTDADGDTGKSG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggagctgtcccccgaggcggccgcttcgcccgccagcgccgaacccgacccc
accccgctactacaccccgccaatggggtgccggatctcgccgtgacagcgagccagatc
gaggccgccgcggcactcctgggccgcggcaacggaccgtttgcggtggacgccgagcgg
gcgtcgggtttccgctactccaatcgggcctacctcattcagatccggcgggccgaggcc
ggcacggtgctcatcgacccggtgagccacggcgaagacccgctgaccgtgctgcggccc
gtcgccgatgtgctcagccaagatgaatggatcctgcacgccgcagaccaggatctgccc
tgtctggacgaagtgggcatgcggccaccggcgctctacgacaccgaactcgccggacgc
cttgccgggtttgaccgggtcaacctggccgccatggtgcagcgcctgctggggctggga
ttggccaaagggcacggggcggcggattggtccaagcgcccgctgccgtcggcctggctg
aactacgcagcgctggacgtcgaggtgctgatcgaactgcgcgccgcgatttcggaggtg
ctgtcccagcacgggaaaaccgactgggccgcgcaggaatttgaacatctgcggaatgcc
gatacccgcacaggcacaccggcggtccggcgggaccgctggcgacggacctcgggcatc
catcgcgtgcatgaccggcggggcctggccgcggtgcgcgagttgtggttggcgcgcgac
cgcgtcgcgcagcgccgcgacatcgcgccccgccggatcttgccggattcggcgatcatc
gaggccgcggtagccgacccgaagtccatggacgacctcatcgccttaccggtgttcggc
gggcgcaaccaacgccgcagtgcatcgatgtggctggccgcactggaggcagcccgacaa
aaccacgatccgcccgagatcgccgagccggccaacggcccgccgcctgcggcccgttgg
ggcagacgaaagcccgatgccgcgacgcggctcggtgcggcccgaaccgccctggcggag
gtgtcccaacgcgtcgaggtaccgacggagaacttggtcgcaccggaactggtgcggcga
ctgtgttgggactgggccgaacccggggaccccgtcgaaacggtccacgaggtcctgcgc
gccggccaagcacgagcctggcagcgagaactcgtggtgccggtactggcggcggcgttg
acacaggccggaaccgccgacaccgatgccgacggtgacactggcaaatccgggtga
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