Mycobacterium spongiae: F6B93_09825
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Entry
F6B93_09825 CDS
T07689
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mspg
Mycobacterium spongiae
Pathway
mspg03030
DNA replication
mspg03430
Mismatch repair
mspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F6B93_09825 (dnaE)
03430 Mismatch repair
F6B93_09825 (dnaE)
03440 Homologous recombination
F6B93_09825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mspg03032
]
F6B93_09825 (dnaE)
03400 DNA repair and recombination proteins [BR:
mspg03400
]
F6B93_09825 (dnaE)
Enzymes [BR:
mspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F6B93_09825 (dnaE)
DNA replication proteins [BR:
mspg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F6B93_09825 (dnaE)
DNA repair and recombination proteins [BR:
mspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F6B93_09825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QUR67354
UniProt:
A0A975JYD9
LinkDB
All DBs
Position
2401303..2404845
Genome browser
AA seq
1180 aa
AA seq
DB search
MSGSVSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAIGMTDHGNMFGASEFYNAV
TKSGIKPIIGVEAYIAPASRFDTRRISWGDPSQKADDVSGSGSYTHLTMLAENATGLRNL
FTLSSLASFEGQLSKWSRMDAELIAEHAEGIIITSGCPSGEVQTRLRLGQHREALEAAAR
WREIVGAENYFLELMDHGLTIERRVREGLLEIGRALNIPPLATNDCHYVTREAAHNHEAL
LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMREIWDHEVPGACDSTLVIAERVQSYADVWA
PRNRMPIFPLPDGHDEASWLRHEVDAGLRRRFPGGPPDVYRERVAYEIDVICAKGFPSYF
LIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMPD
IDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI
TKALPPAIMAKDIPLSGITDPDHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG
VHACAVIMSSEPLTEVIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI
DNIKANRGIDLDLESLPLNDPATFELLGRGETLGVFQLDGGPMRDLLRRMQPTGFEDIVA
VLALYRPGPMGQNAHNDYADRKNGRQAIKPIHPELAGPLEEILAETYGLIVYQEQIMRIA
QKVAGYSLARADILRKAMGKKKREVLDKEYEGFSEGMQASGFSAGAIKALWDTVLPFADY
AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP
DVNESGLNFASVGNDIRYGLGAVRNVGANVVGSLIQTRNDKGKFAEFSDYLNKIDISACN
KKVTESLIKAGAFDSLGHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDAGADAVF
TIKVPDDEWEDKHKLALEREMLGLYVSGHPLNRVAHLLSAQVDTAIPAILDGDVPNETQV
RVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIADDAVVLVNAKV
AVRDDRIALIANELVVPDFSGARADRPLAVSLPTRQCTVDKVSALKQVLARHPGTSQVHL
RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttctgtttcgcggtcctttgtgcacctgcataaccacaccgagtattcgatg
ctggacggtgccgcgaagatcaccccgatgctcgccgaggttgagcggttgggaatgccc
gcgatcgggatgaccgaccacggaaacatgttcggcgccagtgagttctataacgcggtg
acaaagtccgggatcaagccgatcatcggggtggaggcgtatatcgcgcccgcgtctcgt
ttcgatacccggcgcatctcctggggcgaccccagtcaaaaggccgacgatgtctccggt
agtgggtcctacacacacctgacgatgctggccgagaacgccaccggactgcgcaacctg
ttcacgctgtcctcgctggcctccttcgagggccagctcagcaagtggtcgcgcatggat
gccgagctcatcgccgaacatgccgagggcatcatcatcaccagcggctgcccgtcgggg
gaagtgcagacgcgtcttcggctcggccagcaccgtgaagctctcgaggcggccgccagg
tggcgcgagatcgtcggtgcggagaactactttctggaactgatggatcacgggctgacc
atcgaacgacgggttcgggaggggctgctcgagatcggtcgcgcgctcaacattccgccg
ctggccactaacgattgccactacgtcacccgcgaagccgctcacaatcacgaggcgctg
ttgtgcgtgcagaccggcaagacgttgtcagatcccaatcgcttcaagtttgacggcgac
ggttactacctcaagtcggccgccgaaatgcgcgagatctgggaccacgaagttcctggt
gcttgtgattccacgctggtgatcgccgaacgggtccagtcctacgccgacgtatgggcg
ccgcgtaaccggatgcccattttcccgctgccggatgggcacgacgaggcgtcgtggctg
cgtcacgaggtggatgccgggctgcgccgtaggttcccaggcggtccgcccgatgtctat
cgcgagcgcgtcgcctacgagatcgacgtcatctgcgccaagggcttcccgtcatacttc
ttgatcgtcgccgacctgatcaactacgcgcggtcggtgggcatccgggttggcccgggc
cgaggctccgcggcgggctcgctagtggcctacgcgcttggcatcaccgacatcgacccg
atcccacacggactgctcttcgagcggtttctcaatccggagcgcacgtcgatgcccgac
atcgatatcgacttcgacgaccgccgccgtggcgagatggtgcgctacgccgccgacaag
tggggccacgaccgggtcgcccaggtcatcaccttcggcaccatcaaaacgaaggcggcg
ttgaaggattcggcacgcatccactacggccagcccgggttcgcgatcgccgaccggatc
accaaggcgctgccgccggcgatcatggccaaggacatcccactgtccggcatcaccgac
ccggaccacgagcggtacaaggaggccgccgaggtccgcgggctgatcgaaacggatccc
gacgtgcgcaccatttaccagacggcgcgcggtctggagggtctgatccgcaacgccggc
gtgcacgcgtgcgcggtgatcatgagcagcgaaccgttgacggaggtcattccgctgtgg
aagcggccgcaggacggggccatcatcaccggttgggactatccctcgtgcgaggcgatc
ggcctgctgaagatggacttcctgggtctgcgcaatttgacgatcatcggcgacgccatc
gacaacatcaaggccaaccggggtatcgacctggacctggagtcgctgccgctcaacgat
ccggccacctttgagctgctgggccgtggtgagacgctgggtgtgttccaactcgacggc
gggccgatgcgcgacctgctgcgccgaatgcagcccaccgggttcgaggacatcgtcgcg
gtgctcgcgctgtaccggcccggaccgatgggccaaaacgcgcacaacgactacgccgac
cgtaagaacggccgccaagcgatcaagccgatccacccggagctggccggaccgcttgag
gagattctggccgagacctacggcctgatcgtttaccaagagcagatcatgcgtatcgcg
cagaaggtggccggctactcgctggctcgagccgacattctgcgcaaggcgatgggcaag
aagaagcgcgaggtgctcgacaaagagtacgaaggcttctcggaaggaatgcaggccagc
ggtttttcggcgggagctatcaaagcgctctgggacaccgtcctgccgttcgcggactac
gccttcaacaagtcgcacgccgccggctatggcttggtctcctattggactgcctacctc
aaggccaactacccggccgagtacatggccggtctgttgacctcggttggcgacgacaag
gacaaggcggcggtctatctcgccgactgccgcaagctgggcatcacggtgctgccgccg
gacgtcaacgagtcgggactgaactttgcctcggtgggtaacgacatccgttacggcttg
ggtgcggtgcgcaacgtcggtgccaacgttgtcggttcgttgatccaaacccgcaacgac
aagggcaagtttgctgagttctcggactacctgaacaagatcgacatctcggcgtgcaat
aagaaggtcaccgagtccctgatcaaggcgggcgcgttcgattcgctcgggcacgcacgc
aagggcctcttcttggtgcataccgacgccgtcgactctgtgctgggcacgaagaaggcc
gaggccatgggccagttcgatctgttcggtggtagcgatgccggcgcggacgcggtgttc
acgatcaaggtgcctgacgatgagtgggaggacaaacacaaactggccctggagcgcgag
atgctggggttgtacgtgtccgggcatccactgaaccgggtcgcgcacttgctgtccgct
caggtcgacaccgcgatcccggcaatcctcgatggtgacgttcccaatgagacccaggtg
cgggtcggcggcatcctggcttcggtgaacagacgagtcaacaagaatgggatgccttgg
gcatcagcgcaattggaagacctcaccggtggtatcgaggtcatgttctttccgcatacc
tactctagctacggtgccgacatcgccgatgacgcggtggtgctcgtcaacgcaaaggtg
gccgtccgtgacgaccgcatcgcgttgatcgccaacgagctagtggtgcccgatttctcc
ggagcccgcgccgaccggccgctggccgtgagcctgcccacccgccaatgcactgtcgac
aaggtcagtgcactcaagcaggtgctggcccgccatcccggcacctcgcaggtgcatttg
cggttgatcagcggggaccgcatcaccacgctagagcttgatcagtcgctgcgagtcaca
ccgtcaccggcgctcatgggggacttgaaggagctgctgggtccggggtgtcttggcggc
tag
DBGET
integrated database retrieval system
