Mycobacterium spongiae: F6B93_13590
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Entry
F6B93_13590 CDS
T07689
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mspg
Mycobacterium spongiae
Pathway
mspg03030
DNA replication
mspg03430
Mismatch repair
mspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F6B93_13590
03430 Mismatch repair
F6B93_13590
03440 Homologous recombination
F6B93_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mspg03032
]
F6B93_13590
03400 DNA repair and recombination proteins [BR:
mspg03400
]
F6B93_13590
Enzymes [BR:
mspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F6B93_13590
DNA replication proteins [BR:
mspg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F6B93_13590
DNA repair and recombination proteins [BR:
mspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F6B93_13590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
BioY
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QUR69806
UniProt:
A0A975PYY8
LinkDB
All DBs
Position
3333960..3335909
Genome browser
AA seq
649 aa
AA seq
DB search
MIIPNVMAVHSANGTQLSFAELQPAWFAAAGPEPDTDPEVSLRETTFVVVDLETTGGRTK
GTGDALPDAITEIGAVKVRGGVVLGEFATLVDPQRSIPTQIVALTGITTAMVCNAPTIEV
VLPMFLEFAGTSVLVAHNAGFDIGFLRAAARHCGITWPRPRVLCTVQLARRVLSREEAPS
VRLAALARLFAVTTQPTHRALDDARATVDVLHGLIERVGNQGVNTYSELRSYLPDVPPAQ
RRKRALADGLPHRPGVYLFRGPSGEVLYVGTAVDLWRRVGQYFNGTDTRARMKEMVALAT
RVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEPFPRLSVVRAPRHD
RVVGPFRSRADATQTATLFARFSGVRTCTTRLARSARHGPACPELEVSPCPATRDVTATQ
YAAAVQRAAALIDGLDNTALAAAVDHVAALAERCRYESAARLRDHIATAVEVLWRGQRLR
ALAKLPELIAALPDGPPGQGGYQLAVIRHGQLAAAGTARRGVPPMPVVDAIHASAQTIVP
ASAPLGGALVEETGLIARWLAGPGVRIVRVADHATGWTSPLRSAGPWTAWAAAARSARLA
AEQIDGAASELLTEPNPAREQLFGGTGVNRRAGSPQPVLPRRAPFSAAG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatccctaacgtcatggccgtgcactcggccaatgggactcagctgagtttcgcc
gaactccagccggcctggttcgcggccgcaggccccgagcccgataccgacccggaagtg
tcgttgcgtgagaccaccttcgtggtagtcgatctcgagaccacgggcggacgcacgaag
ggcactggggacgcacttcccgacgccatcaccgagatcggggcggtcaaggtgcgcggc
ggcgtcgttctcggtgaattcgcgactctggtagacccccagcgcagcattccgacccag
atcgtcgcgctgaccggcattaccacagccatggtgtgcaacgccccaaccatcgaggtc
gtcttgccgatgtttctcgaattcgccggcacatcggtactggtcgcccacaacgcgggg
ttcgacatcgggttcctgcgtgccgccgcgcgacactgcggcatcacctggccgcgaccg
cgggtcctgtgcacggtccagttggcgcggcgggtgctaagccgcgaggaagcacccagt
gtgcggctggccgcactggcgcggctattcgccgtcaccacccagcccacccaccgagcc
ctcgacgatgctcgcgccaccgtcgacgtgttgcacgggctcatcgaacgagtgggcaac
cagggcgtgaatacatactccgagctgcgctcttatctgcccgacgtaccccccgcacag
cggcgcaagcgagcgctcgccgacggcctgccacaccgtccgggggtctacctgttccgg
ggaccatcgggcgaagtgctttatgtcggtactgcggtcgatctctggcggcgggtgggc
cagtacttcaacgggaccgatacccgggctcgaatgaaggagatggtcgccctggccacc
agggtcgaccacgtcgaatgcgcgcatgcgctcgaagccggagtacgagagctgcggatg
ctggccgcgcatgccccgccatacaaccgtcgatcgaggtttccgcaccgctggtggtgg
gtgaccttgaccgacgaaccgtttccgcgcctgtcggtggtccgtgctccgcgacacgac
cgcgtcgtcggcccatttcggtcgcgcgcagacgcgacccagacggcaaccctgttcgcg
cggttctccggagtccgaacgtgcaccacccggctggcgcgttccgcccggcacggacca
gcctgccccgagctcgaggtctcaccctgcccggccacacgcgatgtgacggccacccaa
tacgcggcggcggtgcagcgcgccgcggcattgatcgacgggctggacaacaccgcgctg
gccgccgccgtcgatcatgtcgcggcgctcgccgaacgctgtcgatacgagagcgctgcc
cggctgcgtgaccacatcgccactgctgtcgaggtgctgtggcgcggccaacgattgcgc
gcgctggccaagctgcccgagctgatcgcagcgctgccggacggtccccctggacaaggg
ggctaccagctcgccgtcatccggcacggccaacttgcggcagccggtaccgcccgccgc
ggggtgccaccgatgcctgtggtcgatgcaatccacgccagcgctcagacgatcgtgccc
gcgtcggcccctctgggcggtgcgctggtcgaggagaccggactcatcgctcgctggctg
gctggaccaggagtgcgcatcgtccgggtcgccgaccatgccacggggtggacctcaccg
ttgcggtcggccggcccctggactgcctgggcggctgcggcgcggtcggcacgattggct
gccgagcagatcgacggtgcggcctcagagctgctgactgaaccgaatccagcgcgcgag
cagttgttcggcggcaccggtgtcaatcgccgcgctggctcgccgcagcccgtccttcca
cgccgggcgccattcagcgcggccggataa
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