Mycobacterium spongiae: F6B93_16325
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Entry
F6B93_16325 CDS
T07689
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mspg
Mycobacterium spongiae
Pathway
mspg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F6B93_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mspg03000
]
F6B93_16325
03400 DNA repair and recombination proteins [BR:
mspg03400
]
F6B93_16325
Enzymes [BR:
mspg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
F6B93_16325
Transcription factors [BR:
mspg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F6B93_16325
DNA repair and recombination proteins [BR:
mspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F6B93_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QUR68435
UniProt:
A0A975K006
LinkDB
All DBs
Position
4036727..4038235
Genome browser
AA seq
502 aa
AA seq
DB search
MHEDFERCYRAVQAKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFLPTAAAAQRE
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGTVDREGVAGLAAHLGYTTRQLERL
LQSEVGAGPLALARAQRMQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTVRLMSDSTPT
ELRRRAATRFGSSKPTGTSPGTVSLRLAVRTPFAYEGVFGHLAATAVPGCEAVRDGAFRR
TLRLPSGNGLVSLTPAPDHVRCLLVLDDFRDLATATARCRRLLDLDADPEAIVEALGADP
DLSAVVAKAPGQRIPRTVDEAELAVRAVLGQQVSTKAARTHAGKLVAAYGSPVHDADGTL
THTFPSVEQLAEVDPLHLAVPTARQRTLKALIAGLADGSVRVDAGCDWGRARTQLLELPG
VGPWTAEVIAMRGLGDPDAFPASDLGLRLAATQLGLPRQPGRLTKHSVRWRPWRSYATQH
LWTTLEHPVNQWPPKEPLKEMT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgaagacttcgaacgctgctaccgggcggtccaggccaaggacgcccgtttcgac
ggctggttcgtgacggcggtgctgaccaccggaatctattgtcggcccagttgccctgtc
cggccgcccttcgcccgcaacgttcgcttcctcccgactgccgcggccgctcagcgggaa
gggttccgcgcctgcaaacggtgccgtcccgacgcatcgccaggttctcccgaatggaat
gtgcgtggtgacgtggtggcgcgggcgatgcggctgatcgccgacggaaccgtggaccgc
gagggggtcgccggccttgccgcccacctcggctacacgacccgtcagctggaacgcttg
ttgcagtccgaggtcggcgccgggccgcttgcgctggcgcgtgcgcaacgcatgcagacc
gcgcgggtgctcatcgagacgacagacctgccattcggcgatgtcgctttcgccgcaggg
ttttccagcatccgccagttcaacgacaccgtgcgactcatgagcgacagcacgccaaca
gagctccgcagacgcgcagcaacccgattcggatcctccaagcccacgggcacttccccc
ggaacggtgtccttgcgactagcggtgcggacgccattcgcgtatgaaggcgtttttggc
catctggccgccaccgcggtgccaggttgcgaggcggtgcgcgatggcgcgttccgtcgc
acactgcggctcccgtccggcaacggactcgtttccctgacacccgcaccggatcatgtg
cggtgcctgttggtactcgacgatttccgcgatctggccacagcgaccgcgcgctgccgc
cggctcctggacctcgatgcagatcccgaagcgatcgtcgaggcactcggcgccgatccg
gacctgagcgcagtggtggccaaggctcccggacaacgcattccccgcaccgtagacgag
gccgagctcgccgtgcgggcggtgttgggccagcaggtatccaccaaggccgcacgaacg
catgcgggcaaactggtggccgcctatggcagtcccgtccacgatgccgatggcacgctg
acccacaccttcccgtccgttgagcagcttgctgaggtcgatcccctgcacctggccgtc
cccacagcacgacaacggacgctcaaggcgctgatcgccggcctcgcggacggcagtgtc
cgggttgacgccgggtgcgactggggacgcgcacgcacccagctgttggaattgccgggt
gtcgggccctggaccgccgaggtcatcgccatgcgcgggctcggcgacccggacgccttt
cccgccagcgacctcggtctcaggctcgccgccacgcaacttggcctacctcgacaacca
ggcaggctcaccaagcacagcgtccgctggcgtccctggcgctcctatgccacccaacac
ctgtggaccactctggaacatccggtcaatcaatggccccccaaggagccactcaaggag
atgacatga
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