Mycobacterium spongiae: F6B93_18355
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Entry
F6B93_18355 CDS
T07689
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mspg
Mycobacterium spongiae
Pathway
mspg03420
Nucleotide excision repair
mspg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F6B93_18355 (pcrA)
03430 Mismatch repair
F6B93_18355 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mspg03400
]
F6B93_18355 (pcrA)
Enzymes [BR:
mspg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F6B93_18355 (pcrA)
DNA repair and recombination proteins [BR:
mspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F6B93_18355 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
F6B93_18355 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
QUR68776
UniProt:
A0A975JZV3
LinkDB
All DBs
Position
complement(4509797..4512190)
Genome browser
AA seq
797 aa
AA seq
DB search
MTVHATDAEAPGSNPADQLLDSLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLI
AARRVGVGQILAITFTNKAAAEMRERVAGLVGDRARYMWVSTFHSMCVRILRNQASVVEG
LNSNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPHQALADLSDD
SDELARTVASVFAEYQRRLRAANALDFDDLIGETVAVLASFPQIAQYYRRRFRHVLVDEY
QDTNHAQYVLVRELVGRGTPETRPESSDSADDSADEVPPAELCVVGDADQSIYAFRGATI
RNIEDFERDYPDATTILLEQNYRSTQNILSAANSVIARNSGRRDKRLWTDAGAGELIVGY
VADNEHDEARFVAEEIDALAERGDITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGV
RFYERREIRDIVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVSVYAENTGASFADA
LQAAAEGKVSMLNSRAEKAIAGFVDLLDDLRGRLDDDLGELVEAVLERSGYRRELESSTD
PQELARLDNLNELVSVAHEFSTDRTLAASDDAAPDEAETPVDEDVPDTGVLADFLERVSL
VADTDEIPEQGAGVVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDDPGELSEERRLA
YVGITRARQRLYLSRAMVRSSWGQPMLNPESRFLREIPQELIDWRRSAPPPSYSAPVSGA
GRFGTPRPSPMHPGARSGASKRPLLVLQPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFG
SSGRVKLMHNHAPLSKL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcacgcgaccgatgccgaagcccctggttcaaacccagccgatcagctgctc
gacagcctcaaccctcaacaacgccaggcggtggtacatgagggttctccgctgctgatc
gtcgccggcgctggctcggggaagacggcggtgttgacccgccggatcgcctatctgatc
gcagcccgccgggtgggggtcgggcagattctggccatcaccttcaccaacaaggccgcc
gccgagatgcgcgaacgggtcgcgggtctggtcggcgaccgagcccggtacatgtgggtg
tcaacatttcactcgatgtgcgtgcgcattctgcgcaatcaggcgtcggtggtcgagggc
ctcaactccaacttctcgatctatgacgccgacgattcgcggcgtttgctgcagatgatc
ggccgcgacatgggcttggacatcaagcggtattcgccccggttactggccaatgcgatc
tccaatctgaagaacgagctgatcgacccgcaccaggcgctggcggatctttcggacgac
tctgatgagctggcccgcacggtggcatccgtcttcgccgagtaccagcggcggttacgg
gcggccaacgcgctggacttcgacgaccttatcggcgagaccgtggccgtgcttgcgagc
ttcccgcagatcgcccagtactaccggcggcgattccgccatgtcctcgtcgacgagtac
caggacaccaaccacgctcagtacgtgttggtgcgcgaattggtcggtcgcggcacgcca
gagacacgcccagaatcatcagactccgcagacgattcggccgatgaggtgcctccggcg
gaattgtgcgtcgtcggcgacgccgaccagtcgatctacgcgttccgcggtgccaccatt
cgcaacatcgaggacttcgaacgcgactaccctgacgccacaacgattctgctggaacag
aactaccggtcgacgcagaacatcctgtcggcggccaactcggtgatcgcgcgcaactcg
ggccgccgcgataagcggctgtggaccgatgccggggcaggggagctgatcgtcggctac
gtcgccgacaatgagcacgacgaggcccggttcgtcgccgaggagatcgacgcgctcgcc
gagcgcggcgacatcacctacaacgatgtcgccgtcttctaccgcaccaacaactcgtcg
cgctcgttggaggaagtgtttatccgcgccggaattccgtacaaagtcgttgggggagtg
cggttctacgaacgtagagagatccgcgacatcgtcgcttacctgcgggtgctggacaat
cccggcgatgcggtgagcatgcgacgcattctcaacacaccgcgccgcgggatcggtgat
cgcgccgaggcgtgcgtgtcggtatatgccgaaaacaccggcgcaagcttcgctgacgcg
ctgcaggccgcggccgaaggcaaggtgtcgatgctgaacagccgcgcggagaaggcgatt
gcgggcttcgtcgacctgctcgacgatctgcggggtcgccttgacgacgaccttggcgag
ctggtggaggccgtgctcgagcgcagcggctaccgcagggagctggaatcgtcgaccgac
ccgcaggagctggcgcgactggacaacttgaacgaactcgtcagcgttgcacacgaattc
agtaccgaccgcacccttgcggccagcgatgacgctgcacccgatgaggcagaaaccccc
gtagacgaggacgtgccggacaccggcgtcctggcggacttcctggagcgggtgtcgctg
gtggctgacaccgacgaaatccccgagcagggcgccggtgtggtcacgttgatgacgttg
cacactgccaagggcctggaattcccagtggtattcgtgaccggctgggaggacggaatg
ttcccgcatatgcgggctctcgacgacccgggcgagctttccgaggagcggcggcttgcc
tacgtgggcatcacccgtgctcggcaacggctgtacctgagtcgagccatggtccgttct
tcgtggggccagccgatgctcaacccagagtctcggttcttgcgggaaatcccgcaggaa
ctgatcgactggcggcgcagcgcaccgccgccgtcgtacagtgcgccggtcagcggagcc
ggtcggttcggaacgccgcgcccatcacccatgcacccaggagcccgttcgggagcgagc
aagcgcccgctgctggtgctgcagccgggcgaccgggtgacccacgacaagtatgggttg
ggccgcgtcgaggaggtttccggtgtcggcgaatcggcgatgtcgttgatcgacttcggc
agttcgggccgcgtcaagctgatgcacaaccacgccccgctctcgaagctgtag
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integrated database retrieval system
