Microbulbifer spongiae: M8T91_04345
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Entry
M8T91_04345 CDS
T10475
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mspn Microbulbifer spongiae
Brite
KEGG Orthology (KO) [BR:
mspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mspn03016
]
M8T91_04345
Enzymes [BR:
mspn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M8T91_04345
Transfer RNA biogenesis [BR:
mspn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M8T91_04345
Prokaryotic type
M8T91_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WKD50664
LinkDB
All DBs
Position
1057616..1058578
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AA seq
320 aa
AA seq
DB search
MTEGWKLDWPRALGAVYVSADFRTEPEDFVVEELAFPPPSENGEHVYLQIRKRGANTAWV
AKQLATLAGVNTSDVGYFGLKDRHGLTTQWFSVWLGKKLQPDWSRLNGPEISVLHTFRGS
RKLRRGEHSGNRFKIRLRSIRGKRAAAEQRLDKISAGVPNYFGEQRFGIHGNNLDLVRHL
AEGGGGCGKSKKAFAMSAARSWLFNQVLAERVDAGNWREVLDGEPEANPSGPLWGRGRNP
ASRVQEELEQRALLPWQPWCNWLEHCGLRQERRALVLRPEAFHYQWEEDSLVLGFSLSHG
EFATALLREVAQLVNVKSST
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggctggaaactggattggccgcgggcgttgggtgcagtgtatgtgagcgca
gactttcgcactgagccggaagactttgttgttgaagaactggcgtttccgccgccctct
gaaaatggtgagcatgtttatctgcagatcagaaagcgcggcgcaaacacggcctgggtg
gcaaagcagttggcgactcttgccggcgtaaacacctcggatgtgggctatttcggtttg
aaagaccggcatgggttaactacccagtggttcagtgtatggctggggaaaaagctccag
ccggactggtcgcgactcaacggcccggagatctctgtgctgcacacttttcgcggctcg
cgcaagttgcgtcggggcgagcacagcggaaaccggttcaaaatccgcctgcgcagtatt
cgcgggaagcgagctgctgccgagcagagactggataaaattagcgccggtgtgcccaat
tactttggtgagcagcgctttggtatccatgggaacaacctggatttggtccgccatttg
gccgagggtggcgggggctgtggcaaaagcaaaaaggcctttgccatgtccgcagcgcgc
agttggctgtttaatcaggtcctggcagaaagggtcgatgcgggcaactggcgggaggtg
ctcgatggtgagccggaagcaaatcccagcggccctctttgggggcgcgggcgcaatccg
gcatcccgtgtacaggaagagttggagcagcgtgctctgctcccctggcagccctggtgc
aactggttagagcactgcgggctcaggcaggagcgccgggccttggtactacgccctgag
gcgtttcactatcaatgggaagaagacagtctggtgctcgggttttccctgtcccatggt
gaatttgcaacagcgctgttgagggaagtggcccagctggtcaatgtgaaatcaagcact
taa
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integrated database retrieval system
