Microbulbifer spongiae: M8T91_07895
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Entry
M8T91_07895 CDS
T10475
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mspn Microbulbifer spongiae
Brite
KEGG Orthology (KO) [BR:
mspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mspn03032
]
M8T91_07895 (topA)
03400 DNA repair and recombination proteins [BR:
mspn03400
]
M8T91_07895 (topA)
Enzymes [BR:
mspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M8T91_07895 (topA)
DNA replication proteins [BR:
mspn03032
]
Prokaryotic type
DNA Topoisomerases
M8T91_07895 (topA)
DNA repair and recombination proteins [BR:
mspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M8T91_07895 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
WKD51329
LinkDB
All DBs
Position
1859174..1861861
Genome browser
AA seq
895 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPTGGGRKGPVDAKARARRAAETR
RLSPEAKAAYKRKKSHEQLIKRMGIDPDHGWLAHYEILPGKEKVVSELRKLAENADHIYL
ATDLDREGEAIAWHLREAIGGSDDRYRRVVFNEITKSAIQGAFKDPGRLNINRVNAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWSLFADTKT
DNADKLRLEVKKQAGQVFRPVNEAQANSAVRQLESSAFVVSGRDDKPTSSKPGAPFITST
LQQAASNRLGFGVKKTMTLAQRLYEAGHITYMRTDSTNLSGEAVESAREYIGEHYGDPYL
PKVPNTYSSKAGAQEAHEAIRPSDVRVGPNMLSGAERDAERLYNLIWQQFVACQMTPAQF
TSTSIVVSAGEFELRARGRVIRFDGFLKVAPSGGKKEEDLELPDVKVGDRLALQKLDPKQ
HFTKPPARFSEAALVRELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFKNLMDYGFTANLEESLDAVAEGEKGWKQLLDEFYRDFSARLEKAQSTDKGMRRN
TPTDTDITCSRCGRHMQIRTGSTGVFLGCSGYALPPKERCVNTMNLVSGDEAVDADTDEE
AESRLLREKRRCAKCGTAMDSYLLDEHRKLHICGNNPDCSGYAIEQGTFKIKGYDGPVIE
CDKCGSDMQLKSGRFGKYFGCTNEACKNTRKLLKNGQPAPPKMDPVPMPELVCLKVDDHY
ILRDGATGLFLAASQFPKKRETRAPLVKELLPHQSEIDPKYSFLFSAPLKDNEGRDTVVR
FSRKMQQQYVQSEEGGKATGWRAFYREGTWQVEPGGKSTAARRKPPRKKAAQGNQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactggtcattgttgaatcaccggccaaagcgaaaaccatcaacaaatac
ctcggcaaggactttgtggttaagtccagcgttggccatattcgcgatttgcccacaggt
gggggccgcaaagggcctgttgatgctaaggcgcgggcgcgacgcgcggcggaaacccgc
aggctctccccggaggcgaaagcggcatacaagcgcaaaaagagtcacgagcaactgatt
aaacgcatgggcatagacccggatcacggctggttggcacattacgaaatcctgccaggc
aaggaaaaagttgtcagtgaattgcgcaagctcgccgaaaacgctgaccatatctacctg
gcgacggacctggatcgcgagggagaggcaatcgcctggcatttgcgcgaggccatcggc
ggtagtgacgaccgctatcgcagggtagtctttaacgaaatcaccaagtcggcaattcag
ggcgccttcaaagatcccgggcgattgaatatcaaccgggtgaatgcccagcaggcacgg
cgttttctcgaccgtattgtcgggtatatggtatcgccgctactttgggaaaaagtggcc
agggggttgtctgcagggcgcgtgcagtctgtggccgtacgccttgtcgtggagcgggag
cgggagatccgtgcctttattccggaagagtactggtccctgtttgcagacacaaaaacc
gataatgccgacaagctgcgccttgaagtcaaaaagcaggcaggtcaggtattccggccc
gtcaatgaggcccaggcgaatagcgccgtgcggcaactggagtccagtgcgtttgttgtt
agcgggcgggacgacaaaccgaccagctccaagcccggtgccccgtttatcacctcgaca
ttgcagcaagcggcgagcaaccgcctcggtttcggtgtgaagaagaccatgaccctggct
cagcgtttgtatgaagcggggcatattacctacatgcgtaccgattccactaatctcagt
ggcgaggctgtggaatctgcccgggaatatatcggcgagcactacggcgatccgtatctg
ccgaaggtgcctaacacctacagcagcaaggcaggggcccaggaggcccacgaggccatt
cgaccctccgatgtgcgtgtgggcccgaatatgctatcgggggcagaacgcgatgcggaa
aggctctacaacctaatctggcaacagtttgtcgcctgccagatgacgccagcacaattt
acctctacctcaatcgtggtcagcgccggcgaatttgaactgcgcgctcgcggccgggtt
atccgctttgacgggttcctcaaagtggcgccttccgggggcaaaaaggaggaggatctg
gaactgccggacgtaaaagtcggcgacaggctcgccctgcagaaattggacccgaaacaa
catttcaccaaacccccagcgcgttttagtgaggcggccctggtgagagaattggaaaaa
cgcggcattggccggccctccacctatgcgtcaatcatttccaccattcaggaccgcggc
tatgtgcgtttggaaaaccggcgtttctacgcggaaaagatgggcgacattgttaccgat
cgcctcagtgaaagcttcaaaaatttaatggactatggttttaccgcgaacctggaagag
tccctggatgcggtggccgagggggagaaaggttggaaacagttactcgatgagttctat
cgggacttctccgctcgcctggaaaaggcgcagtctaccgataagggcatgcgtcgcaat
actccgactgacacggatattacctgtagcaggtgcggacgccatatgcaaattcgcacg
ggttccaccggggtattcctgggctgttccggttatgctctgcccccgaaggagcgctgc
gtcaataccatgaacctggtatccggcgatgaggcggtggatgcggacacagatgaggaa
gcggaatcccgccttttgcgcgagaagcgccgttgcgccaaatgtggcacggccatggac
agctacctgctggatgagcaccgcaagctccacatctgtggtaacaatccagattgcagc
ggttatgcaattgagcagggcacctttaagatcaaagggtacgatggcccggtgatcgag
tgtgacaagtgcggcagtgacatgcaactgaagtctggccgttttggtaagtactttggt
tgtaccaatgaagcttgtaaaaacacccgtaagttattgaaaaatggccaaccggcgccg
ccgaaaatggacccggtgcccatgccggagctggtgtgcttgaaagtggatgaccactat
attctgcgcgatggtgccaccgggcttttcctggccgcgagtcagttccctaaaaaacgc
gaaacacgcgcccccctggtcaaagagttactgcctcaccagagcgaaatcgaccccaag
tacagcttccttttttctgccccgctcaaagacaacgaggggcgggacacggtggtgcgt
ttcagtcgtaagatgcagcagcaatatgtgcagtctgaagaggggggcaaagcgacagga
tggcgtgctttctatcgcgaaggcacttggcaggttgagcccggtggtaaaagcaccgct
gccagacgtaaacccccgcgcaagaaagccgctcaaggtaatcaatga
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