Microbulbifer spongiae: M8T91_14605
Help
Entry
M8T91_14605 CDS
T10475
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mspn Microbulbifer spongiae
Brite
Enzymes [BR:
mspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M8T91_14605 (hrpA)
Messenger RNA biogenesis [BR:
mspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M8T91_14605 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WKD49113
LinkDB
All DBs
Position
complement(3500042..3503956)
Genome browser
AA seq
1304 aa
AA seq
DB search
MSHSEAEKTLWALRARISACMGRDRYPLRRTVKHVRRRLGEGKPVDRMLLQLEQQLQASE
VLVEARRRKLPEVQWPETLPVVARREEIAELIEKHPVVVVAGETGSGKTTQLPKICLSLG
RGIYGQIGHTQPRRIAARTVAHRIAEELQQPLGESVGYQVRFTDHSTEHTHVKLMTDGIL
LAEIQRDPLLNQYDTLIIDEAHERSLNIDFLLGYLKTILPKRPDLKLIITSATIDLEKFS
RHFGGAPIIEVSGRTYPVDIHYRPATDSDLELNGQVVAAVEALLHEEKSSLRRGGDILVF
MSGEREIRECAKALRDARIAQLEVLPLYARLSLAEQARVFHGHKGRRVVLATNVAETSIT
VPGIRYVIDPGTARISRYSYRSKIQRLPVEPVSQASANQRAGRCGRVSAGVCVRLYKACD
LEQRPQFTDAEILRTNLAAVILQMLQLRIGDIREFPFIDPPDPRLINDGYKLLQELQAVD
AEGRVTKLGRALSQLPLDPRLGRILLAGAENDSAREVLIIVAALAVQDPRERPAEKRQAA
DEKHRQWQHAQSDFLSFVQLWDTFEAQRQALSQNQLRKWCQRNFLSWLRMREWRDIHHQL
RVACRELEVKENKEPAEYEAVHRAIVTGLVGNIGARDENKEFNGCRNRRYHIFPGSGQFK
KPPPWIVAAQLLETSRLFAHTVAKIEPDWALAAAQHLVKRTYFEPHYDVRSGQVMAFEKV
SLYGLVLVEKRRIPYGKLDPKTARAVFIRQALVEQRYRGKGRFYKHYTDLLQTLEGLEAK
SRRRDILVDDAVIYHFFDERIPAAIVNLAGFEHWRKKAESSDPQLLLIPRDLLMQQSADH
VGEAQFPDELQAGGIVYPLSYHFEPGSVDDGVSIQVPVSALHQVPTARLSWLVPGILRDK
CIALVKALPKQWRKSFVPVPAAVDKALPALRADNTPLWQALALALQRQTAQQLPESAWES
AERALEDYYRFNIQVLDEAGKLLDQGRDLPVLQARYRDRVQQGLANAGDRFERTGITRWD
FDELPETHTLNQGGLKVRAYPALVEAGDSVSLKLLDNPDEAQRVSRAGICRLALLHLPEK
VKYLRKELLRGQELGLSAADLGRREEVADDILMAAVREVFWPKEQWPRTEAEFLSALQED
SEFVGVAREIGDLLVRALALLIPLRKQIKQQKNLAVAMAVGDIQQQLAGLFYRGFLFDTP
LTWLRQYGRYLKAVSLRLEKAERDPNRDRKLQAEYHTAAEPYSSQEERYSRRALAAVAPL
VEYRWMLEEFRVSLFAQSLKTLMPVSVKRLHRVWVEIERKELPG
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacagcgaagcggaaaaaacactgtgggcactgcgggcccgtatctccgcctgt
atggggagggaccgctacccactgcggcggacggttaagcatgtgcgccggcgcctggga
gagggcaagccggtggaccgcatgctgctccaactggagcagcagttgcaggcatctgag
gtgttggtggaggcgcgccggcgcaagctgcccgaggtgcagtggccggagacattgccg
gtggtggcgcgacgcgaggaaattgccgagttgatcgaaaagcatccggtcgtggtggtc
gccggtgagacaggttccggtaaaaccacccagttgccaaaaatctgtctgtccctcggg
cgcggtatctacggacagattggccatacccaaccgcgcaggattgctgcgcgcaccgtt
gcccatcgtattgccgaggaactgcagcaaccactgggggagtctgttggctaccaggtg
cgttttaccgatcacagcactgagcatacccatgtgaagctgatgaccgacggtatttta
ctggcggaaatccagcgcgaccccttgctgaaccaatacgatacgttgattattgatgag
gcccatgagcgcagtctgaatatcgatttcctgctgggttatttgaaaaccattctgccc
aaacgccccgacctcaaactgattatcacctccgccaccatcgatctggaaaaattctcc
cggcattttggtggtgcaccgatcattgaggtttccggccgtacctatccggtggacatt
cactatcgccccgcgaccgacagtgacctggagcttaacgggcaagtggttgctgcggtg
gaggcgctgctgcacgaagagaagtccagcctccggcgcggtggtgacattctggtcttt
atgagcggtgagcgggaaatccgcgagtgtgccaaggccctgcgggatgctcggatcgca
cagctggaggttctgcccctgtacgcccgcctgagcttggctgagcaggccagggtgttt
cacgggcataaaggtcgccgggtagtgcttgccaccaatgtggcggagacgtccattact
gtgccgggcattcgctatgtgatcgacccgggtaccgcccgcatcagtcgctatagctat
cgcagtaagatccagcgcctgccggtggagccggtttcccaggccagtgccaaccagcgc
gccggtcgctgtggccgtgtgagcgccggtgtctgcgtgcgtttatataaagcgtgcgat
ttggagcagcgcccgcaatttaccgatgcggaaatcctgcgcaccaacctggccgcggta
atcctgcagatgctgcagctgcgtatcggggatatccgcgaatttccctttatcgatcca
ccggacccacgcctgatcaatgatggctataagttgctgcaggagttgcaggcggtggat
gccgagggcagggtgaccaagctgggccgcgccctgtcgcaattgccactggacccgcgc
ctgggtcgcatactgttggctggggcggaaaatgacagcgcgcgtgaagtactgattatt
gtcgccgccctggccgtgcaggacccgcgcgaacgcccggcggagaagcgccaggccgcg
gatgagaagcaccgtcagtggcagcacgcgcaatcagactttctctcttttgtgcaactg
tgggataccttcgaggcccagcgccaggcactcagccagaatcagttgcgcaagtggtgc
cagaggaattttctgtcctggctgcgcatgcgcgaatggagagatatccaccatcagttg
cgggtggcctgtcgagaactggaagtgaaagaaaataaagagccggcggagtatgaggcg
gtgcaccgggccatagtgacgggtctcgtcggcaatattggcgcgcgggatgaaaacaaa
gaattcaatggttgccgcaatcgccgctaccatattttccccggctccggacaattcaaa
aagccaccgccgtggatagtggctgcccagttgctggaaaccagtcgcctgtttgcccat
acggtggcaaaaatagagccggattgggcgctggccgcagcccagcacctggtaaagcgc
acctatttcgaaccccactacgatgtccgctccggtcaggtgatggcctttgaaaaggtc
tccctgtacggtttggtcctggtggaaaagcgccgtatcccctacggtaagctggatcca
aaaactgcccgtgcagtattcattcgccaggcattggtggagcagcgctatcgcggcaag
ggccgcttctacaagcactacacagatctgttgcaaacactggaggggttggaagccaag
tcccgccgccgcgatattttggtggatgatgcagtgatctaccactttttcgacgagcgt
ataccagcagctattgtcaacctggccggatttgagcactggcgcaagaaggccgaatcc
agtgatccacagttgctgttgattccccgtgatctcttgatgcagcagagtgcagaccat
gtgggcgaggcgcaattccccgatgagttgcaggctggcggtattgtctatccgctcagc
tatcactttgagccgggcagtgtggatgacggcgtcagtattcaggtgccggtgtccgct
ttgcaccaggtaccaacggcgcgcctgtcctggctggtgccgggtatcctgcgcgacaaa
tgcatcgccctggtgaaggcactgcccaaacagtggcgcaagtcttttgtgccggtaccg
gcggcggtagacaaggcgttgccggcactgcgtgcggataacacgcccctgtggcaggcg
ctggcgctggcactgcagcggcagaccgcccagcaactgcccgagagtgcctgggaatcc
gccgaacgcgccctggaggactattaccgcttcaatatccaggttctggatgaggcgggc
aagctgctcgatcagggccgcgatctcccggtgctgcaggcccgttatcgcgaccgggta
cagcaggggctggcgaatgcaggtgatcgttttgaacgcaccggcatcacccgctgggat
ttcgacgaactgccggaaacccataccctcaatcagggtggccttaaagtgcgggcctat
ccggccctggtggaggcgggagacagtgtgtccctgaagctgctggataaccccgatgaa
gcacagcgggtgagccgcgcgggtatctgccgtctggccctgttgcacctgcccgaaaag
gtgaaatacctgcgtaaggagctgctgcgcggccaggagttggggctttcggccgcagac
ctgggcaggcgcgaggaagtggcggacgatatcctcatggctgccgtgcgcgaggttttt
tggcccaaagagcagtggccgcgtactgaagcggaattcctgtccgccctgcaggaggat
agcgaattcgtaggggtggcccgggaaatcggggacctgctggtcagggccctggcactg
ctgataccgctgcgcaagcagatcaagcaacagaaaaacctggcagtagccatggcggtg
ggtgatatccagcagcaactggcggggctgttctatcgcggtttcctgttcgataccccc
ctgacctggctgcgccagtatggccgctacctgaaagcggtgtctctgcgcctggagaag
gccgaacgggaccccaatcgcgaccgcaaattgcaggcggagtaccacacggctgccgag
ccctatagcagtcaggaggaaaggtattcgagaagggcgttggcagctgtggccccattg
gtggaataccgctggatgctggaggagtttcgggtttccctgtttgcccagagcctgaaa
acgttgatgcccgtgtctgtaaagcgtctccacagggtctgggtggaaattgaacgaaaa
gaattgcctggttga
DBGET
integrated database retrieval system
