Microbulbifer spongiae: M8T91_15830
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Entry
M8T91_15830 CDS
T10475
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mspn Microbulbifer spongiae
Pathway
mspn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mspn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M8T91_15830 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mspn03021
]
M8T91_15830 (rpoA)
03400 DNA repair and recombination proteins [BR:
mspn03400
]
M8T91_15830 (rpoA)
Enzymes [BR:
mspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M8T91_15830 (rpoA)
Transcription machinery [BR:
mspn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M8T91_15830 (rpoA)
DNA repair and recombination proteins [BR:
mspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M8T91_15830 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WKD51650
LinkDB
All DBs
Position
complement(3876199..3877203)
Genome browser
AA seq
334 aa
AA seq
DB search
MQTAVNEFLTPRRIDVTEYNPNHAKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVEHEYSAIEGVQEDVIEILLNLKEIAVVMHGKDQAVLSLSKRGPGAVTAGDIQIDHD
IEIVNPEHVIANITGDVELSLRLTIARGRGYQPADARRSEEEESRTIGRLQLDASYSPVR
RVAYSVESARVEQRTDLDKLVLDLETNGTLDPEEAIRRAATILQQQLAVFVDLEGEKDAQ
PKTEEPEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKGDSKLSPL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctgtcaacgagtttttgacaccgcgtcgtattgacgtcaccgagtacaac
ccgaatcatgccaaggtggttctggaacccctggaacgtggctttggccacactcttggc
aacgcactgcgtcgtatcctgctgtcctccatgccgggctgtgctgtcaccgaagtcgaa
atcgacggcgttgagcatgaatacagcgcgatcgaaggtgtgcaggaagacgttattgaa
atcctgcttaacctgaaagaaatcgcggttgtgatgcacggtaaggatcaggcggtattg
agcctgagcaagcgggggccgggcgcagtaacggccggggatatccagatagatcacgat
atcgagattgtgaaccccgagcacgtgattgccaatatcacgggggatgtggagctcagc
ctgcgtcttaccatcgcgcgcggtcgtggctaccagcccgctgatgcccgtcgtagcgag
gaggaggaaagccgtacaatcggtcgtttgcaactggatgcttcctacagcccggttcgc
cgtgtggcttacagtgtggagagtgcacgtgtagaacagcgcacggatctggacaagctg
gtactggatctggagaccaatggtaccctggacccggaagaggcaatccgccgcgctgcc
accattctgcagcagcagctggcagtatttgtagatctggaaggtgaaaaggacgcacag
ccgaaaacagaggagcctgaggtcgatccggtactgttgcgtccggtcgatgatctggag
ctcacggtacgttcggccaactgtctgaaagcggaaaatatctattatatcggtgatctg
atccaacgcaccgaagtagaattgctgaagaccccgaaccttggcaaaaagtccctcacc
gaaatcaaggacgtactggcttcccggggtttgtctctgggtatgcgcctggagaactgg
cccccggccagcctcaagggtgacagtaaattaagccctttgtaa
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