Microbulbifer spongiae: M8T91_16010
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Entry
M8T91_16010 CDS
T10475
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mspn Microbulbifer spongiae
Pathway
mspn03020
RNA polymerase
Brite
Enzymes [BR:
mspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M8T91_16010 (rpoC)
Transcription machinery [BR:
mspn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M8T91_16010 (rpoC)
DNA repair and recombination proteins [BR:
mspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M8T91_16010 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WKD49388
LinkDB
All DBs
Position
complement(3899130..3903359)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKDLLNLVKSQEQLEEFDAIRIGLASPDMIRSWSYGEVKKPETINYRTFKPEREGLFCAK
IFGPVKDYECLCGKYKRMKHRGIICEKCGVEVTKAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVTEPGMTTLERGQLLNDEQYFEAMEEFADEFEAKM
GAEAIQELMSDIELPAEIQRLREEIPATNSETKIKKLSKRLKLLEAFYKSGNNPEWMIMQ
ALPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFGKLEARGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTIEAQLES
RALMMSTNNILSPANGEPIIVPSQDVVLGLYWMTRERVNDKGEGMYFSDVKEVSRAFYAK
QVGLQAKVKVRIREMILGEDGEKHETISVQDTTVGRALLWNIVPEGLPFALVNQPMKKKP
ISRVLNECYRKVGLKATVIFADQLMYTGFDFSTKSGSSIGVNDFEIPAAKADLITVAEEE
VKEIESQFASGLVTQGEKYNKVIDVWSRTNDKVTKAMMAGIKKEPVVDREGKETEQDSFN
SVYMYADSGARGSEAQIRQLAGMRGLMARPDGSIIENAITANFREGLTVQQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEVDCGTDDGLTMAPVIEGGDVIESLGDRIL
GRVVARDVLKPGSDEIAVSAGTMIDEKWVERIEAMGIDEVLVRSPITCETAHGICAQCYG
RDLARGHRANSGESVGVVAAQSIGEPGTQLTMRTFHIGGAASRASAADSIQVKQAGTVRL
HNVKTVKTEAGTLVAVSRSGELAIADSAGRERERYKLPYGAVINVYEGAEVNGGQIVAKW
DPHTHPIITEVAGWVKLSGMEEGLSIRKQTDEITGLSSIEVIDPAERPAAGKDLRPAVTL
VNESGEELTLANSNAPAHYALPARAILSLADGSKANLGDVIARIPQESGGTKDITGGLPR
VADLFEARKPKEPSILAEISGTVSFGKETKGKVRLQITPRDGKPLANGKDHYEVLIPKHR
QLTVFEGETVEKGEVISDGPSNPHDILRLKGVEELARYITNEIQEVYRLQGVGINDKHIE
TIVRQMLRKVEITEMGDSGFIKGDQVEYQRVIEENEQLRAENKQPAQFERLLLGITKASL
ATESFLSAASFQETTRVLTEAAVTGKEDSLRGLKENVVVGRLIPAGTGLAYHSERKRQRS
LQLEESFGEGPSAAEVEAALTEALKSSGE
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttattaaacctggtgaagtcccaggagcagttggaagagtttgatgcgatt
cgcatcggtctggcctcgccggacatgatccgctcctggtcctacggtgaagtgaaaaag
ccggaaaccatcaactaccgcaccttcaagccggagcgcgaaggtttgttctgcgccaag
atttttggtccggtgaaagactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcattatctgtgagaaatgtggcgttgaagtgaccaaggccaaagtgcgtcgggag
cgtatgggccacatcgaactggccagcccggttgcgcatatctggttcctgaaatccctg
ccgtcccgtatcggcctgctgctggatatgaccctgcgggatatcgagcgcgtgctctac
tttgaatcctacgtggtgaccgagccgggcatgaccactctggagcgcggccagctgctc
aacgatgagcagtacttcgaggcgatggaggagttcgctgacgagttcgaggcgaagatg
ggtgccgaggcgattcaggaactgatgagcgatatcgagctgccggcggaaatccagcgt
ctgcgggaggagattccggccaccaactccgaaaccaagatcaagaaactgtccaaacgc
ctgaagttgctggaggccttctacaagtccggcaacaatcccgagtggatgatcatgcag
gccctgccggtactgccgccagacctgcgtccgctggtacccctggatggtggccgcttt
gcgacttcggatttgaacgacctgtatcgccgagtgatcaaccgcaacaaccgtctcaag
cgcctgctggagctgaatgcaccggatattattgtgcgcaacgaaaagcgcatgttgcag
gaatccgtggacgcgctgctggataacggccgccgcggccgcgccatcaccggctccaac
aaacgcccgctgaagtccctggcggatatgatcaagggcaagcagggccgcttccgccag
aacctgctgggcaagcgcgtggactattccggccgttccgtgattgtggtggggccgacc
ctgcgcctgcaccaatgcggtctgcccaagaaaatggccctggagctgttcaagccgttt
attttcggcaagctcgaagcccgcggcctggccaccaccatcaaggcagccaagaaaatg
gtcgagcgcgaagaggcggtggtatgggatatcctcgatgaagtgatccgcgagcacccg
gtactgctgaaccgcgccccgaccctgcaccgtctgggtattcaggcgttcgagccggta
ctgattgaaggcaaggcgattcagctgcacccgctggtgtgcgcggcctataacgccgat
ttcgacggtgaccagatggcggtgcacgtacccctgaccatcgaagcgcagttggaatcg
cgcgcgttgatgatgtccaccaacaatatcctgtcgcccgccaacggcgagcccatcatc
gtgccgtcccaggatgtggttctggggctgtactggatgacccgcgagcgtgtcaacgac
aagggcgaggggatgtacttctccgacgtcaaggaggtcagccgcgcgttctatgccaag
caggttggcctgcaggcgaaggtcaaagtgcgtatccgcgagatgattctcggagaggat
ggcgagaaacacgaaaccatctctgtacaggacaccacggtaggccgtgcactgctgtgg
aatatcgtgccggaaggcctgccgttcgcgctggtcaaccaacccatgaagaagaagccc
atttcccgtgtgctaaacgagtgctatcgcaaggtgggacttaaggcgacggttattttt
gccgaccagctgatgtacaccggttttgatttctccaccaagtccggttcttccattggt
gtgaacgacttcgagattcccgctgccaaggctgatttgatcactgtggcggaagaggaa
gtgaaggagatcgaaagtcagttcgcctccggtctggtaacccagggggagaaatacaac
aaggtgatcgacgtctggtcccgcaccaatgacaaggtgaccaaggccatgatggccggc
atcaaaaaagagccggtggtcgatcgcgaaggcaaggagaccgagcaggattccttcaac
tccgtctatatgtatgcggactccggtgcgcggggctccgaggcgcagatccgccagctc
gccggcatgcgcggcctgatggcccgtccggacggctccattattgaaaacgccattacc
gccaacttccgcgaaggactgaccgtacagcagtactttatctctacccacggtgcccgc
aagggactggcggataccgcactgaaaaccgccaactccggctacctgacccgccgtctg
gtggacgttgcccaggacgtggtgatcaccgaagtggactgcggcaccgatgatggcctg
accatggcgccggtgattgagggcggcgatgtgatcgagtccctcggcgatcgtatcctc
ggccgtgtcgtggcccgcgatgtgcttaagcccggcagtgacgagatcgcggtttctgcc
ggcaccatgatcgatgagaagtgggtggagcgtatcgaagccatgggcattgatgaggtg
ctggtgcgctcgccaatcacctgtgagaccgcccatggtatctgtgcccagtgttacggc
cgcgatctggcccgcggtcaccgcgccaattcgggtgagtctgtgggggtggttgccgca
cagtccatcggtgagccgggcacccagttgaccatgcgcaccttccatatcggtggtgcc
gcgagccgcgcctctgcggcggacagcatccaggtgaaacaggccggtaccgtgcgcctg
cacaatgtgaagacggtcaaaacggaagccggtaccctggtggcggtatcccgctccggt
gagctggcgatagccgacagtgccggtcgcgagcgcgagcgctacaagctgccctatggt
gcggtgatcaacgtctacgagggtgcagaggtcaatggtggccagatcgtggccaagtgg
gacccgcacactcacccgatcattaccgaagtagccggttgggtgaagctttccggtatg
gaagaagggctctcaatccgcaagcagaccgacgagatcaccggcttgtcctctatcgag
gtgattgatccggccgaacgcccggccgcgggtaaagacctgcgcccagcggtgaccctg
gtgaacgagagtggcgaagagctgaccctggccaacagcaatgcacctgcacactatgcg
ctgccggcgcgcgcgattctcagcctcgccgatggcagcaaggccaatttgggggacgtg
atcgcccgtatcccgcaggaatccggcggtaccaaggatattaccggtggtctgccgcgg
gttgccgacctgttcgaagcccgcaagccaaaagagccgtccatcctggcggaaatttcc
ggcacggtttcctttggtaaagagaccaaaggcaaggtgcgtctgcaaatcaccccccgc
gatggcaagccgctggccaatggcaaggaccactacgaggttctgataccaaagcaccgc
cagctgaccgtgttcgaaggcgagaccgtagagaagggcgaggtgatctccgacggcccg
tctaacccccacgatatcctgcgcctgaagggcgtggaagaactggcgcgctacatcact
aacgagattcaggaggtgtatcgtctccagggcgtaggcattaacgataagcacattgaa
actattgtgcgccagatgctgcgcaaggtggagatcaccgagatgggcgattccggcttt
attaagggcgatcaggtggaataccagcgcgtgatcgaggagaacgagcaactgcgtgcc
gagaacaagcagccggcgcagttcgagcgcctgttgctgggtatcaccaaggcatccctg
gccaccgagtccttcctgtctgcggcctccttccaggagaccacccgggttctgaccgaa
gcggcagtgaccggcaaggaagacagcctgcgcggtctgaaggagaatgtggttgtggga
cgcctgatcccggcaggcaccggcctggcctaccacagtgagcgcaaacgccagcgcagc
ctgcagctggaagagagcttcggcgaaggcccctctgcggcagaagtggaagcggcgttg
accgaggccctgaagtcctctggcgaatag
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