Microbulbifer spongiae: M8T91_17935
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Entry
M8T91_17935 CDS
T10475
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mspn Microbulbifer spongiae
Pathway
mspn03420
Nucleotide excision repair
mspn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M8T91_17935 (uvrD)
03430 Mismatch repair
M8T91_17935 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mspn03400
]
M8T91_17935 (uvrD)
Enzymes [BR:
mspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M8T91_17935 (uvrD)
DNA repair and recombination proteins [BR:
mspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M8T91_17935 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
M8T91_17935 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
AAA_30
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WKD49747
LinkDB
All DBs
Position
4324255..4326459
Genome browser
AA seq
734 aa
AA seq
DB search
MDVSQILDPLNDAQREAVSAAPGNQLVLAGAGSGKTRVLVHRIAWLMRVEGASPYAIMAV
TFTNKAALEMRARIEALLGVNTFGMWVGTFHGLAHRLLKAHWQEAKLPQNFQILDADDQL
RLLKRVQADLGLDEKKWPVRETQWWIGAQKDEGLRPQYIDAGADPWLQTMVRIYAAYEAA
CQRGGLVDFGELLLRAHELWLNNDSILAHYRQRFPFILVDEFQDTNAIQYAWLRLLAGEE
SYITAVGDDDQSIYGWRGARIENIQHFSTDLRSVQTVRLEQNYRSTARILDAANAVIAHN
RGRLGKALWTNGEEGEPISVYAAYNEQDEARFIVERIKDWVRDGNRRDSIAVLYRSNAQS
RVLEEGLLREQVPYRIYGGQRFYERLEIKNALSYLRLIANRNDDTAFERVVNTPTRGIGA
RTVEMVRTFAREQGCSLWQAAKMMLQQRVLAARAGNALQGFQDLINRLAANAEAKKLDVI
AGDVIETSGLLEFHGKEKGEKGQTRVENLQELVSACRAFVGEDLPQDEDQEGAISLLNQF
LDSAALDAGEGQAEEFEDAVQLMTLHSAKGLEFPLVFMAGVEENLFPHKMSAQEPGRMEE
ERRLCYVGITRAMRRLYITYAENRRLFGSETYNSPSRFIGEIPADLVQEVRLKTEISRPL
YQAEYGRVGEFSDPPPDFDDLPPLALGGRVDHPKFGEGTVLQFEGSGPRARVQVNFDDVG
SKWLLVAMAKLQPM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctcagattctagaccccctcaacgacgcacagcgcgaggcggtatccgcg
gcacccggcaatcaattggtgctggccggggccggttcgggcaaaacccgcgtattggtt
caccgcatcgcctggctgatgcgcgtggagggggcctcgccctacgccattatggcggtg
accttcaccaataaagcggcgctggagatgcgtgcccgtatcgaagcactgctgggggtg
aataccttcggcatgtgggtgggcactttccacggcctcgcccaccgcctcctcaaggcc
cactggcaggaggccaaactgccgcaaaacttccagatactcgatgccgacgaccagctg
cgcctgctcaagcgggtgcaggcggatctgggtctggacgagaaaaaatggccggtacgc
gaaacccagtggtggatcggtgcgcaaaaggacgaggggttgcgccctcagtatatcgat
gccggtgccgacccctggctgcagaccatggtgcgcatttacgctgcctacgaggcggcc
tgccagcgtggtgggttggtggatttcggcgaattgctgctgcgcgcccacgaattgtgg
ctgaacaatgacagcatcctcgcccactatcgccagcgcttcccctttatcctggtggac
gagtttcaggacaccaacgcgattcaatatgcctggctgcgcctgctggccggtgaagag
agctatatcactgcggttggcgacgacgaccagtccatctacggttggcgcggcgccagg
atcgagaatatccagcacttttccacagacctgcgcagtgtgcagacagtgcgcctggaa
cagaattaccgctccactgcccgtatcctagacgccgccaacgcagtgatcgcccacaac
cgcggtcgccttggcaaagcgctgtggaccaatggcgaagagggggaacccatctccgtc
tacgccgcctacaacgaacaggatgaggcgcgttttattgtcgagcgtataaaagactgg
gtgcgcgacggcaaccggcgggacagtatcgccgtgttgtatcgctccaacgcccagtcg
cgagtactggaagaggggctcctgcgcgagcaggtcccctatcgcatttacggtggccag
cgcttctacgaacgcctggaaatcaagaatgcgctgtcctacctgcgcctgatcgccaac
cgcaacgacgacaccgccttcgagcgggtggtgaacacacccacacgcggaataggcgcg
cgcaccgtggagatggtgcgcaccttcgcccgcgagcagggctgctccctgtggcaggcg
gccaagatgatgttgcagcagcgggtgctcgccgcccgtgccggcaatgccctgcaggga
tttcaggatttaattaaccggctggccgccaatgccgaagccaaaaagctggatgtaatc
gccggagatgtgattgaaaccagcggcctgctggaattccacggcaaggaaaaaggcgag
aaaggccagacccgggtggagaacctgcaggagctggtcagtgcctgtcgcgcttttgtc
ggcgaggatctgccccaggatgaagatcaggagggagcgatttcactgctcaaccagttc
ctcgatagtgcagcactggatgccggcgaagggcaggcagaggaatttgaggacgcggtg
caactgatgaccctgcactctgccaagggcctggaattccccctggtgtttatggctggc
gtggaagaaaatctgtttccccacaaaatgtcagcacaggagccaggccgtatggaggag
gagcgccgcctctgctatgtgggtatcacccgcgccatgcgcaggctgtatatcacctat
gcggaaaaccgccgcctgtttggcagtgaaacctacaacagtccctcccgctttatcggc
gagataccggccgacctggtgcaggaggtgcggctgaaaaccgagatatcacgaccgttg
taccaggccgagtatggcagggtgggagagttttccgacccgcctccggatttcgacgac
ctgccccccctggctttggggggccgtgtcgatcaccccaaatttggcgagggcaccgta
ttgcaatttgaaggcagcggcccccgcgcccgtgtgcaggtcaactttgacgatgtcggc
agcaagtggctgttggtggctatggcaaagttacagcccatgtaa
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