Mycetocola spongiae: KXZ72_02060
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Entry
KXZ72_02060 CDS
T08087
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mspo
Mycetocola spongiae
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KXZ72_02060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mspo03021
]
KXZ72_02060
Transcription machinery [BR:
mspo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KXZ72_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
AphA_like
CDC27
Motif
Other DBs
NCBI-ProteinID:
UCR89506
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All DBs
Position
427009..428346
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AA seq
445 aa
AA seq
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MATKNTQASEVTEEKTAAPAAATRKTTTTKSAAAKSAATKTVVAEADSAEAPAVKKAAAK
APAKKAPATKATAPAKKPATKRATKKDAVDEALEAADVEDVNEEEESKKKSDIPENLPKD
ALVLSSQDDEDEVPVYSAAITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAE
DKLANEGEGMKPQLRRELTWVAKDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQE
GNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQ
RQMLQDLGREPTPEELSRELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDTE
AVVPADAVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERI
RQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaaatacgcaggcttcggaagtgaccgaggagaaaaccgcggcacccgcg
gcggcaactcggaaaaccacaaccacgaagtcggcagcggcaaaatccgctgccaccaag
accgtggtggccgaggcggactccgccgaggctcccgcggtaaaaaaggccgccgcgaag
gcgcccgcaaaaaaggcgcccgccaccaaggcgactgcaccggcaaagaagccggcgaca
aagcgcgccaccaagaaggacgccgtagacgaggccctggaagcggccgatgttgaggat
gttaacgaggaggaggagtccaagaagaaatcggatatccccgagaacctgccgaaggac
gcgctggttctctcctctcaggacgacgaggatgaggtccccgtctactccgcggccatc
accggcgccaccgccgacccggtcaaggactacctgaagcagatcggtaaggtcgcgctg
cttaacgccgccgaggaggttgagctcgcgatgcgtatcgaggccggcctcttcgccgag
gataagctcgcaaacgagggcgagggcatgaagccccagctgcgtcgcgagctcacctgg
gtggctaaggacggccagcgcgccaagagccacctgctgggtgcgaacctgcgcctcgtg
gtctcgctggcgaagcgttataccggccgcggaatgcagttcctggacctgatccaggag
ggaaacctgggcctgatccgtgcggtcgagaaattcgactacaccaagggctttaagttc
tccacgtatgccacctggtggatccgtcaggccatcacccgcgccatggccgaccaggcc
cgcaccatccgtatcccggtgcacatggttgaggttattaataagctcgcccgcgtgcag
cgccagatgctccaggacctgggccgcgagcccacccccgaggagctcagccgcgagctg
gacatgacgcccgaaaaggtcgttgaggtgcagaaatacggccgcgagcccatctcgctg
cacacgcccctgggcgaggacggcgatagcgagtttggtgacctcatcgaggataccgag
gccgtggtccccgccgatgccgtgggcttcacgatgctgcagaagcagctcgagtcgctc
ctggactccctgtccgagcgcgaggccggagtcatccggatgcgctttggcctgggcgat
ggcatgccgaagacgctggatcagatcggcgataccttcggtgtgacccgcgagcggatc
cgtcagatcgagtcgaagacgatggccaagctgcgccacccgtcccgctcgcagtcgctg
cgtgactaccttgagtag
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