Mycetocola spongiae: KXZ72_03605
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Entry
KXZ72_03605 CDS
T08087
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mspo
Mycetocola spongiae
Pathway
mspo03030
DNA replication
mspo03430
Mismatch repair
mspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KXZ72_03605 (dnaE)
03430 Mismatch repair
KXZ72_03605 (dnaE)
03440 Homologous recombination
KXZ72_03605 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mspo03032
]
KXZ72_03605 (dnaE)
03400 DNA repair and recombination proteins [BR:
mspo03400
]
KXZ72_03605 (dnaE)
Enzymes [BR:
mspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KXZ72_03605 (dnaE)
DNA replication proteins [BR:
mspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KXZ72_03605 (dnaE)
DNA repair and recombination proteins [BR:
mspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KXZ72_03605 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
UCR89772
LinkDB
All DBs
Position
complement(757804..761319)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAPTDNQFVHLHVHSEYSMLDGAARVKPLVAAAAEAGMPAVAVTDHGNVFGAFDFWKSAT
DAGVKPIIGTEAYITPGTHRSDRTRIRWGDGSRDDVSGSGAYTHMTLLSETTEGMHNLFR
LNSLASIEGYYFKPRMDRELLETYGKGLIATTGCPSSEIQTRLRLGQYDEARKAAAEYQD
IFGKENYFCEIMDHGLDIERRVIGDLLKIAKDLQIPLVATNDLHYTHEHDAKSHSALLCV
QSGSTMDDPNRFKFDGESYYLKTAEEMRDLFRDHPDACDNTLLIAERCNVEFNTKANYMP
RFPVPPGENEDSWFIKETEKGLHERYPNGIPANVRERADYEVGVIIQMGFPGYFLVVADF
INWSKENGIRVGPGRGSGAGSMVAYVMKITDLDPIQHGLIFERFLNPERVSMPDFDVDFD
DRRRGEVITYVTEKYGDERVAQIVTYGTIKAKQALKDSSRVLGFPYGMGEKLTKAMPPAI
MGKDIPLTGIFDKDHPRYKEAVDIRSVIESDPEARTVFDTALGLENLKRQWGVHAAGVIM
SSEPLIDIVPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIRSNRN
EELVLEDLTLDDVAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYRPG
PMGVNSHTNYALRKNKQQEIVPIHPELEEPLHEILGGTYGLIVYQEQVMSAAQKLAGFSL
GQADVLRRAMGKKKKSELDKQQADFFGGMAANGYSQEAMDALWKVLESFADYAFNKAHTA
AYGLVSYWTAYLKAHFPAEYMAALLTSVGDSKDKLAIYLNECRRMGIKVLPPDVNESIGF
FAAVGEDIRFGLGAVRNVGTNVVEGIRSARAEKGRYENFHDYLAKVPMQATNKRSVESLI
KAGAFDSLGNTRRALVEIHEDAVDSAVGLKRNEAKGQVDLFAGIFDLDEVNSQVPDRPEW
NKRDKLAFEREMLGLYVSDHPLAGLELQLAKHASTTITDLMASEATQDGDTVTIAGLVTG
VQHRVAKQSGNQYGMITVEDFGGEITVMFMGKGYQEFSQQLIADSIVVVRGRVSMRDDGM
NLHAYSLIAPEFEQSDNLGLLHLSMPDSRASTQLIGELREVLLRHPGESELRIRLIRGDV
ARVFEVPNYPVRVSPDLFGELKSLLGPNCLS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
ttggcccccactgataatcagtttgtccatctgcacgtccacagcgagtactcgatgctc
gatggtgccgcacgcgtaaaacccctcgtggccgccgccgcggaggccggtatgccggcc
gtggccgtgaccgaccacggcaacgtctttggggcgttcgatttttggaaatccgccacc
gatgccggcgtgaagcccatcatcggcaccgaggcgtatatcacccccggcacgcaccgc
tcggatcgcacgcgaatccgctggggcgatggctcgcgcgatgacgtctcgggctcggga
gcctatacccatatgacgctgctgtccgagaccaccgagggcatgcacaacctgttccgg
ctcaactcgctggcctcgatcgagggctattattttaagccgcgcatggaccgcgaactg
ctggaaacctacggcaagggcctgatcgccaccaccggctgcccgtccagcgagatccag
acccggcttcgcctggggcaatacgacgaggcacgcaaggccgccgccgaatatcaggac
atcttcggcaaggaaaattatttctgcgagatcatggaccacggtctggatatcgagcgc
cgtgtcatcggcgatctcctgaagatcgccaaggaccttcagattccgctcgtggccacc
aacgacctgcactatacccatgagcacgatgccaaatcgcattcggccctgctgtgtgtg
cagtcgggcagcacgatggacgatcccaaccgctttaaatttgacggcgaatcctattat
ctgaaaaccgccgaggagatgcgtgatctcttccgcgatcacccggatgcctgcgataac
acgctgctcatcgccgagcgctgcaacgtcgaatttaataccaaggccaactatatgccg
cggttcccggtgcccccgggagaaaacgaggacagctggttcatcaaggagaccgagaag
ggcctgcacgagcgctatccgaacggtatccccgcaaatgtgcgcgagcgtgccgattat
gaggtgggcgtcatcatccagatgggcttccccgggtatttcctcgtggtggccgacttc
atcaactggtccaaggagaacggcattcgggtgggtcccgggcgtggttcgggtgccggt
tcgatggtggcctatgtgatgaaaatcaccgatctggatcccatccagcacggcctgatc
ttcgagcggttcctcaaccccgagcgtgtgtcgatgcccgacttcgatgtggacttcgat
gatcgtcgccgcggcgaggtcatcacctatgtgaccgaaaaatacggcgatgagcgcgtg
gcccagatcgtgacctatggcacgattaaggccaagcaggcgctgaaggactcctcgcgt
gtgctgggcttcccctatggcatgggagagaagctcaccaaggccatgccccccgcgatc
atgggtaaggatatcccgctcaccgggatcttcgataaggaccacccgcgctataaggag
gccgtggatatccgctcggtgatcgaatccgatcccgaggcacgcacggtatttgataca
gcgctgggcctggaaaacctgaagcgccagtggggtgtacacgccgccggtgtgatcatg
tcctccgagccgctgatcgacatcgtgccgatcatgaagcgcgagcaggacggccagatc
gtcacccagtttgactaccccgcgtgtgagagcctgggcctgatcaagatggacttcctg
gggttgcgcaacctcacgatcatcgacgatgccctggataatatccgctccaaccgcaac
gaggagctggtgctcgaggacctcacgctcgatgatgtggccgcctatgagctgctggcc
cgcggcgataccctcggggtattccagctggatggtgggcccatgcgctcgctcctgcgc
ctgatgaagcccgataattttgaggacatctcggccgtgctggcgctctaccgcccgggc
ccgatgggtgtgaactcgcataccaactatgcgctgcgtaaaaataagcagcaggagatc
gtgccgatccaccccgagctggaggagccgctgcacgagatcctgggcggtacctatggc
ctgatcgtatatcaggagcaggtcatgagtgcggcgcagaagctcgccgggtttagcctc
ggccaggccgatgtgctgcgccgcgcgatgggtaaaaagaagaagtctgagctggataag
cagcaggccgatttctttggtggaatggcggccaatggctattcccaggaggccatggac
gcgctctggaaggtcctggaatccttcgccgactacgcctttaacaaggcacatacggcg
gcctacgggctggtgtcctattggaccgcctatcttaaggcgcatttcccggccgagtat
atggcggcgctgctgaccagcgtgggcgattccaaggataagctcgcgatttatcttaac
gagtgccgccgcatgggcattaaggtcctgccgccggatgtgaacgagtcgatcggcttt
tttgccgccgtgggcgaggatattcgctttgggctgggggccgtgcgcaacgtgggcacc
aacgtggtggaggggatccgaagcgcgcgcgccgaaaagggccgctatgagaacttccac
gactatctcgcgaaggtgccgatgcaggccaccaataagcgcagcgtggaatcactgatt
aaggccggcgcctttgactcgctgggcaatacccggcgcgcactggtggagatccacgag
gacgccgtggattccgcggtgggtcttaagcgcaacgaggccaagggccaggtggatctt
tttgccgggatctttgacctggacgaggtgaactcgcaggtacccgatcggcccgagtgg
aataagcgcgataagctcgcgtttgagcgcgagatgctgggcctttatgtctccgatcat
ccgctcgccgggctcgaattgcagctggccaagcacgcctccaccacgatcaccgatctg
atggcctccgaggccacccaggacggcgataccgtgaccatcgccgggctggtgaccggg
gtacagcaccgcgtggccaagcagtccggaaatcagtacggcatgatcaccgtggaggac
ttcggtggcgagatcaccgtgatgttcatgggtaagggctatcaggagttctcccagcag
ctgattgccgactcgattgtggtggtgcgcgggcgggtgagcatgcgagatgacggcatg
aatctgcacgcctatagcctgatcgcccccgagtttgagcagtccgataatctgggcctg
cttcacctatcgatgccggattcccgggcgagtacccagctgatcggggagctgcgcgag
gttttgctgcgccacccgggcgagagtgagctgaggatacgtttgattcgcggcgatgtt
gcgcgcgtcttcgaggtaccgaactatcctgtacgggtgagcccggacctcttcggcgag
ctgaaatctctgctcggcccgaactgtttgagctaa
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integrated database retrieval system
