Mycetocola spongiae: KXZ72_04815
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Entry
KXZ72_04815 CDS
T08087
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mspo
Mycetocola spongiae
Pathway
mspo00300
Lysine biosynthesis
mspo00470
D-Amino acid metabolism
mspo01100
Metabolic pathways
mspo01110
Biosynthesis of secondary metabolites
mspo01120
Microbial metabolism in diverse environments
mspo01230
Biosynthesis of amino acids
Module
mspo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KXZ72_04815 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KXZ72_04815 (dapF)
Enzymes [BR:
mspo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KXZ72_04815 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UCR89990
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All DBs
Position
complement(1048111..1049010)
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AA seq
299 aa
AA seq
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MANTLDFTKGHGTGNDFVLITDPAGERVLTPGLIAALCDRHFGIGADGLIRAVRSESLPA
GEAILAEDPGAEWFMDYYNADGSTAEMCGNGIRVFVKYLIDTGLVTPVRGETLAIGTRAG
VRDVQVSAQGFAVDLGRWRLDENGPLVHPRGVQVARPGLGINVGNPHVVVALADDSELEG
ADLSVAPILDPAPPEGANVELVVPRAHLVQDGVGQIRMRVHERGSGETLSCGTGIAAAAL
ATRHWAGPGAPHQWRVEVPGGVVAVRMFPTEEGEHVSLSGPAELVYSGSVDLDRLRREG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatactctcgatttcactaagggacacggcaccggcaacgactttgtgctgatt
accgatcccgccggcgagcgtgtgctcacccccggcctgattgccgcgctatgtgatcgc
cattttggcatcggcgccgatggcctgattcgcgccgtgcgctccgaatcgctgcccgcc
ggggaggccatcctggccgaggatcccggggccgagtggtttatggactattacaacgcc
gatggctccaccgccgaaatgtgtggcaacggcatccgcgtttttgtgaagtatctgatc
gataccggcctggtcaccccggtgcgcggggagaccctcgcgatcggcacccgcgccggg
gtgcgcgatgttcaggtatccgcgcagggtttcgcggtggatctgggccgctggcgcctg
gacgaaaacggccccctggtgcacccgcgcggtgtgcaggtagcccgacccgggctcggc
attaacgtgggcaatccgcatgtggtggtggcgctcgccgatgactccgagctggagggc
gccgatctgagtgtcgcgccgattctggacccggccccgcccgagggggcgaatgtggaa
ctggtggttccgcgcgcccatctggtgcaggacggtgtggggcagattcgcatgcgcgtg
cacgagcgcggttcgggggagaccctgtcctgcggaaccggtattgccgcggccgccctc
gccacccggcactgggcgggccccggggccccgcatcagtggcgcgtggaggtacccggc
ggcgtggtggccgtgcggatgttccccaccgaggagggtgagcatgtctcgctctcgggt
ccggcagagctggtatattccggcagcgtggaccttgatcgcctgcgccgggagggctag
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