Mycetocola spongiae: KXZ72_05415
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Entry
KXZ72_05415 CDS
T08087
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mspo
Mycetocola spongiae
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mspo03016
]
KXZ72_05415 (truB)
Enzymes [BR:
mspo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KXZ72_05415 (truB)
Transfer RNA biogenesis [BR:
mspo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KXZ72_05415 (truB)
Prokaryotic type
KXZ72_05415 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UCR90105
LinkDB
All DBs
Position
complement(1172861..1173787)
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AA seq
308 aa
AA seq
DB search
MSSGIVLVDKPGGMTSHDVVARTRRLAGTRKVGHAGTLDPMATGLLILGLNSATRLLTYV
VGLDKEYTATIVLGADTTTDDAEGETLTVASPAAISAVTEAAIAAGITALSGDILQVPSS
VSAIKVNGERAYARVRAGETVELKSRPVTISAFEVLETRRGEDRIELDVRVECSTGTYIR
ALARDLGAGLGVGGHLSALRRTRIGPFMVGDAASLEDLAPAQQLIASASAAAMLFPTVTL
DAQRAVDLGHGKRIGLEGFPETSGPIAALAPGGRLIGLVSAGSTTARCIVNFPTDAAAED
SPEGPAQS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggaatcgtcctggtggataaaccgggcggaatgacaagtcatgatgtggtg
gcgcgcacccgccgcctggccggtacccgcaaggtgggccatgccggcaccctcgacccg
atggccacgggcctgctgattcttgggctgaactccgccacgcgcctcctcacctatgtg
gtgggcctggataaggagtacacggccacgattgtgcttggcgccgataccaccaccgat
gacgccgagggtgagaccctcaccgtggcctctcccgccgcgatttcagcggtcaccgag
gccgcgattgccgcgggcatcaccgccctcagcggcgatattttgcaggttcccagctcg
gtcagcgcgattaaggtcaacggcgaacgcgcctatgcccgggtgcgtgcgggcgagacc
gtggaactgaaatcccgcccggtcacaatctccgcctttgaggtcctggagacgcgccgc
ggcgaggaccggatcgaactcgatgtgcgcgtggaatgctccaccggaacctatattcgt
gccctcgcgcgcgatctgggtgcgggcctgggcgtgggcgggcatctcagcgcgctgcgg
cgcacgcggatcgggccgtttatggtgggcgatgccgcgagccttgaggacctggccccc
gcgcaacagctgatcgcctcggcctcggccgccgcgatgcttttccccacggtcaccctc
gacgcccagcgcgcggtggacctgggccacggcaaaaggatcggcctggagggtttcccc
gagacctcgggcccgatcgccgcgctggcccccgggggacgcctgattgggctggtctcg
gccggctccacaaccgcccgctgcatcgtgaacttccccaccgatgccgcggccgaggac
agcccggaaggacccgcgcagtcgtga
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