Mycetocola spongiae: KXZ72_07370
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Entry
KXZ72_07370 CDS
T08087
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mspo
Mycetocola spongiae
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mspo03032
]
KXZ72_07370 (topA)
03400 DNA repair and recombination proteins [BR:
mspo03400
]
KXZ72_07370 (topA)
Enzymes [BR:
mspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KXZ72_07370 (topA)
DNA replication proteins [BR:
mspo03032
]
Prokaryotic type
DNA Topoisomerases
KXZ72_07370 (topA)
DNA repair and recombination proteins [BR:
mspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KXZ72_07370 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Extensin_1
Toprim_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UCR87848
LinkDB
All DBs
Position
complement(1645925..1648921)
Genome browser
AA seq
998 aa
AA seq
DB search
MSATKKLVIVESPTKMKSIAGYLGEGYEVLSSVGHIRDLAEPKNLPAELKKGGMGKFAVD
VDNGFEPYYVVSDSKKKTVADLKRALKDADELLLATDEDREGEAIAWHLLQVLKPKVPVR
RMVFHEITKDAILAAKDNTRELDVALVDAQETRRILDRIYGYEISPVLWRKVGPSLSAGR
VQSAATRLIVERERERQAFVSAEYWDIAVQVSAEEDPIRFEARLVRLDGERIASGRDFSD
RGELTGTARQLDAASAAKLAEALAAPETHSRVSKLETKPYSRRPAAPFTTSTLQQEAARK
LRFSARQTMSVAQSLYENGYITYMRTDSPSLSKQAIDAARAQATSLYGADSIPDKPRIYA
GKSKNAQEAHEAIRPSGDNFRTPSSLKSALSGNDYRLYELIWKRTVASQMADAKGQTATV
TVESAAAGQIAEFTASGTVITFRGFLHAYEEGQDEQRNAENAAAREAKLPPLTEGQSVNL
SDVEAKGHETTPPPRYTEASLVKTLEELGIGRPSTYAQTIATIMDRGYVSQRGQALIPTW
IAFSVIRLLEEHFAGLVEYDFTASMEEDLDRIAAGEQDRTQWLNSFYFGGEDGSGLRQVI
DNLGEIDAREINSIHLSDTITLRIGKYGPYLEITDPEAAPDATPRRVNIPEDLAPDELTV
AKAQELIDAPVQTDRVLGVNPENGKEIVAKDGRFGPYVTELEPEPAVEADAATGEVIEPA
KKKPAKKAAAVKPRTSSLFKSMSLDTLDLETALRLLDLPRVVGIDPESGEEILAQNGRFG
PYMKKGAETRSLTTEDQIFEIDLPGALEIYAQPKYGAKRASSSLKEFAEDPESGKPIKVK
DGRFGPYVTDGTTNATIPKSETVEEITFERAVELLAAKRAKGPAKPKAKKAPAKKAPAKK
PAAKKPAAKTTATKTAAAKTTAAKTTAAKSTTAAKAATTKAATTKAATTKAATTKAATTK
AATTKAATTKAAATKAAKAAATKAAKAAAEAAGEGSGE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagccacgaagaagctggtcatcgttgagtcgccgaccaagatgaagtccatcgcc
gggtatctcggtgagggctatgaggtcctcagttctgttggacacattagagacctcgcc
gagcccaaaaacctccccgccgagcttaaaaagggtgggatgggcaaatttgcagtagac
gtcgacaacgggtttgaaccgtattacgtcgtctccgatagcaagaaaaaaacggtggcc
gacctcaaacgtgcactcaaggacgccgacgaactcctcctcgcaaccgatgaagaccgc
gagggtgaggccatcgcatggcacctcctgcaggtgctcaagcccaaggttcccgtgcgc
cgcatggtcttccacgaaatcactaaggacgccatcctcgcggccaaggacaacacccgc
gaactcgacgtcgcactcgtggacgcccaggaaacccgccgcatcctcgaccgcatctac
ggctacgaaatctcccccgtgctctggcgcaaggtgggccccagcctgtccgccggccgc
gtccagtccgccgccacccgcctgatcgtggagcgcgaacgcgaacgccaggccttcgtc
tcggccgaatactgggacatcgccgtgcaggtcagcgccgaggaagaccccatccgcttc
gaggcccgcctcgtgcgcctcgacggcgaacgcatcgccagcggccgcgacttctccgac
cgcggagagctcaccggcaccgcccgccagctcgacgcagccagcgccgcgaagctcgcc
gaggccctcgccgcccccgagacccactcgcgcgtctccaagctcgagaccaagccgtat
tcgcgccgtcccgccgccccgttcaccacctccacactgcagcaggaggccgcgcgcaag
ctgcgcttctccgcccggcagaccatgagcgtggcgcagtcgctctacgaaaacggatat
atcacctatatgcgtaccgactcgccctcgctgagcaagcaggccatcgatgccgcgcgc
gcccaggccacgagtctctacggagccgatagcatcccggataagccccgcatctacgcc
ggcaaatccaaaaatgcgcaggaggcccacgaggccatccgcccctcgggagataacttc
cgtaccccgtcctcgctgaagagcgcactctcgggcaatgactaccgcctctacgagctg
atctggaagcgcaccgtcgccagccagatggccgatgccaaggggcagaccgccaccgtc
acggtggagtccgccgcggccggtcaaatcgccgagttcaccgccagcggaaccgtcatc
acgttccgcggcttcctgcacgcctatgaggagggccaggacgaacagcgcaacgccgaa
aacgccgccgcccgcgaggccaagctgcccccgctcaccgagggccagagcgtaaacctc
agcgatgttgaggccaagggtcacgagaccaccccgcccccgcgctataccgaggcgagc
ctggtcaagaccctggaagagctcggtatcgggcgtccgtccacctacgcacagaccatc
gcgaccatcatggaccgcggctatgtgagccagcgcggccaggccctcattcccacctgg
atcgccttcagcgtgatccggctcctcgaggaacacttcgccgggctggtggaatacgat
ttcaccgcctcgatggaggaagacctcgaccgcatcgcggccggggagcaggaccgcacc
cagtggctgaactcgttctacttcggtggcgaagacggctcgggcctgcgccaggtcatc
gataacctcggcgagatcgacgcccgggagatcaactcgatccacctgagcgataccatc
accctgcgcatcggaaaatacggcccctacctggagatcaccgatcccgaggccgcaccc
gatgccaccccgcgtcgcgtgaatatccccgaggacctcgcccccgatgaactcaccgtg
gccaaggcccaggaactcatcgacgcgcccgtgcaaaccgatcgggtgctgggcgttaac
ccggaaaacggcaaggagatcgtggcaaaggacggccgcttcggcccctatgtcaccgag
ctggagcccgaacccgccgtggaggccgatgccgcaaccggcgaggtgatcgaaccggcc
aagaagaagcccgccaagaaggccgcggccgtcaagccgcgcacctcctcgctgtttaag
agcatgtcgctggataccctcgacctggaaaccgcgctgcgcctgctggacctgccgcgc
gtggtgggcatcgatcccgagagtggcgaggaaatcctcgcccaaaacggccgctttggg
ccgtatatgaaaaagggtgccgagacgcgctccctcaccaccgaggaccagatcttcgag
atcgacctgcccggtgccctcgaaatctacgcccagcccaaatacggtgccaagcgtgcc
tccagttcgctgaaggaattcgccgaggaccccgagagcggtaagccgatcaaggtcaag
gatggccgcttcggtccgtatgtgaccgacggcaccaccaatgccacgattcccaaatcg
gaaacggttgaggagatcaccttcgagcgcgcggtggagctgcttgccgccaagcgtgca
aagggcccggccaagccgaaggcaaaaaaggccccggcgaaaaaggccccggccaagaag
cccgccgccaagaagcccgcggcgaaaaccaccgccacgaagactgcggccgcgaagacc
acggccgcgaagaccacggctgccaagtccaccaccgctgcaaaggccgcaaccacgaag
gctgcgaccacgaaggccgcaaccaccaaggccgcaaccaccaaggctgcgaccacgaag
gccgcgaccacgaaggctgcaaccaccaaggccgccgcgaccaaggctgccaaggccgcc
gcgaccaaggctgccaaggccgccgcggaggccgcgggcgagggctcgggcgagtaa
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