Mycetocola spongiae: KXZ72_09730
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Entry
KXZ72_09730 CDS
T08087
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mspo
Mycetocola spongiae
Pathway
mspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KXZ72_09730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspo03019
]
KXZ72_09730
03400 DNA repair and recombination proteins [BR:
mspo03400
]
KXZ72_09730
Enzymes [BR:
mspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KXZ72_09730
Messenger RNA biogenesis [BR:
mspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KXZ72_09730
DNA repair and recombination proteins [BR:
mspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KXZ72_09730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
UCR88258
LinkDB
All DBs
Position
complement(2153260..2155389)
Genome browser
AA seq
709 aa
AA seq
DB search
MSSSQTQLDALAILADLTGVPGAQFHDGQYEAISTLVEQRRRALVVQRTGWGKSAVYFIA
TLLLRRRGAGPTLLVSPLLSLMRDQVSAAARAGVRAVAINSANAHEWESARAALAADEVD
VLLVSPERLNNPRFRDEQLPELMSRIGMLVIDEAHCISDWGHDFRPDYRRLAELIRSLPE
DLPVLATTATANARVVTDIEEQLSVDEAGVVTIRGSLARRSLRLGVLDLADSRARLGWLL
SHLGDLTGSGIIYTLTVSAAEDTARLLREAGHNVRAYTGRTDTDEREESELLLKNNQLKA
LVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRGTDSADVLLLPGSEDREIWH
YFATASMPDEARAEAVLAALDFDRPLSTPALEARVNIRRSPLELLLKVLDVDGAVRRVEG
GWVATGAPWHYDAPRYDRIRRARLDEQQSMIDYQRGPGCRMETLQRDLDDATAAPCGRCD
RCTQAWYPSDVAAEAAGVAAASLDRVSVEIEPRRQWPTGADQLGVLLDGSPVRGKIPESL
RLEPGRAVARLTDLGWGNTLRELFAPGTPDAPVSEGLLGASVRVLAEWGWAERPAAVVSL
PSRSHPLLVDSVARGLSRVGRLPYLGSLDLLGEGPRGSSGGNSGYRLASVWDGFTLGPEL
AAALEEYRGRPILLVDDRVDSRWTITVAGGLLRRAGAGSVLPFALALTA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcgcagacgcagcttgatgccctggccattctggccgacctcaccggggtt
cccggcgcacaattccacgacggccaatacgaggccatctccacgctggtggagcagcgc
cggcgggccctcgtggtgcagcgcacgggttggggaaaatccgcggtctatttcatcgcc
acgctgctgctgcgccggcgcggtgccggccccacgctgctggtctcgcccctgctctcg
ctcatgcgcgatcaggtctccgcggccgcgcgggcgggagtgcgcgcggtggccattaac
tcggccaatgcccacgagtgggagagtgcgcgcgcggccctcgcggccgatgaggtagac
gtgctgctggtctcgcccgagcgcctgaataacccgcgcttccgggatgagcagctgccc
gagctgatgtcgcggatcggcatgctggtaatcgatgaggcccactgtatttccgattgg
ggccacgatttccgtcccgattatcgccgcctggccgagctcatccgctcgctcccggag
gatctgcccgtcctggccaccaccgccacggccaatgcccgcgtggtcaccgatatcgag
gagcagctgagtgtggacgaggccggggtggtcaccatccgcggctccctcgcgcgccgc
tccctgcggctgggggtattggatctcgccgattcccgcgcccggctgggctggctgctg
agccacctcggtgatctcaccggttcgggcatcatctataccctcacggtctcggccgcg
gaggataccgcgcggctgctacgcgaggcggggcataacgtgcgggcgtatacgggtcgc
acggataccgatgagcgcgaggaatccgagctgctcctaaaaaataatcagctgaaggcg
ctcgtggccacgagcgcgctgggcatgggttttgataagcccgatctgggctttgtggtg
cacctcggtgccccctcctcgcccgtggcctattatcagcaggttggtcgcgcgggccgc
ggcaccgatagcgccgatgtcctgcttcttcccggctcggaggatcgcgagatctggcat
tattttgccaccgcgtcaatgcccgatgaggcccgcgccgaggccgtgctcgcggcacta
gattttgaccgccccctgtccaccccggccctcgaggcgcgggtaaatatccggcgttcg
ccgctggagctgctgcttaaggtgctggatgtggacggcgcggtgcgccgggtcgagggc
ggctgggtggccacgggtgcgccgtggcactatgacgccccgcgctacgatcggattcgg
cgcgcacgcctggatgagcagcagtcgatgatcgattatcagcgcggcccgggctgccgc
atggaaacgcttcagcgcgatcttgacgatgccacggccgccccgtgtggccgctgcgat
cgctgcacacaggcctggtatccgagcgatgttgcggccgaggccgcgggggttgcggcg
gcctcactggatcgggtgtcggtcgagatcgagccgcgccggcagtggcccacgggggcc
gatcagctcggcgtcctgctggatggctcgcccgtgcgcggcaagattcccgagtccctg
cgcctcgagccgggccgcgcggtggcgcgcctcacggatctgggctggggcaataccctg
cgtgagctttttgccccgggcaccccggatgccccggtctccgagggcctgctgggcgcc
agcgtgcgggtgctcgcggagtggggttgggcggagcgtccggccgcggtggtatccctt
ccctcgcgctcgcatccgctgctggtggactcggtggcgcgcggcctgtcccgcgtgggt
cggctcccgtatctggggtccctggatctgctgggcgagggcccgcgcggttcctcgggc
ggaaatagcggctatcggttggcctcggtctgggacggcttcactctgggtcccgagctc
gccgcggccctcgaggagtatcgcggccggcccatcctgctggtagacgatcgggtggat
agccgctggaccatcaccgtggcgggtggcctgctgcgccgcgcgggcgcgggtagcgtg
cttccgtttgccctcgcgctcacggcttag
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