Mycetocola spongiae: KXZ72_10985
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Entry
KXZ72_10985 CDS
T08087
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mspo
Mycetocola spongiae
Pathway
mspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KXZ72_10985 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspo03019
]
KXZ72_10985 (recQ)
03400 DNA repair and recombination proteins [BR:
mspo03400
]
KXZ72_10985 (recQ)
Enzymes [BR:
mspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KXZ72_10985 (recQ)
Messenger RNA biogenesis [BR:
mspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KXZ72_10985 (recQ)
DNA repair and recombination proteins [BR:
mspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KXZ72_10985 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UCR88481
LinkDB
All DBs
Position
2407536..2409368
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AA seq
610 aa
AA seq
DB search
METSSAPTAIDILQRVFGYDSFRGDQAAIVDRVVAGGDAVVLMPTGGGKSLCYQVPALLR
EGTAIVVSPLIALMQDQVDALLAVGVRAAFLNSSQDAAERERVERAYLDGALDLLYVAPE
RLSSEQTKRFLGNGHISLFAIDEAHCVAQWGHDFRPDYLALSELADRWPDVPRIALTATA
TEATHREITTRLRMENAEHFVASFDRPNIQYRIVNKNEPRKQLLEFIRAEGAGQVGIIYA
LSRKTVEKTAEFLQANGVNALPYHAGLDAGLRQRTQARFLREDNVVIVATIAFGMGIDKP
DVRFVAHIDLPKSIEGYYQETGRAGRDGEPSVAWLAYGLADVVQQRRMIDESPGDMAHRR
RLSAHLDAMLALCETVECRRVNLLTYFGQPSQPCGNCDVCLTPPQVWDGTVPAQKLMSTI
VRLQRERNQSFGAGQIIDILRGKTTPRTTQWGHETLATWGIGQDLSEQQWRGVVRQLLAR
GLLLTTGEYGTLALSQTSPEVLSGGRTVPMRSEPERSKSRGGGGARRAAHPELDPRDAGL
FEALRAWRAAEATEQGVPAYIVFGDATLRQVAAERPTELSGLDGVTGIGEKKLEKYGAGL
IGVVTGYEGE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgagcgcacccacggccatcgatatcctgcagcgcgtatttgggtatgac
tcgttccgcggggatcaggcggccatcgtggaccgcgtggtggccggcggcgatgccgtg
gtgctgatgcccaccggtggcggaaagagcctgtgttatcaggtgcccgccctgctgcgc
gagggcacggcgattgtggtatcgcccctgatcgccctgatgcaggaccaggtggatgcg
ctgctcgccgtgggagtgcgtgcagcatttttgaactccagccaggatgccgccgagcgc
gagcgggtcgagcgcgcctatctggacggtgcactggacctgctctatgttgcccccgag
cggttgtcctcggagcagaccaagcgtttcctcggcaacggccatatctcgctctttgcc
atcgatgaggcgcactgtgtggcgcagtgggggcacgatttccggcccgattatctcgcg
ctgagtgagctcgccgatcgctggcccgatgtgccgcggatcgccctgacagccaccgcc
accgaggccacccaccgcgagatcaccacgcggctgcggatggaaaacgccgaacatttt
gtggcgagctttgaccggcccaatattcagtaccggatcgtaaataaaaacgagccgcgc
aagcagctgctggagtttatccgcgccgagggtgccggccaggtgggcattatttatgcg
ctgagccgcaagacggtggaaaaaaccgccgagtttttgcaggccaatggcgtaaatgcg
ctgccgtatcacgcggggctcgacgcgggcctgcgccagcgcacccaggcgcgcttcctg
cgcgaggataacgtggtgatcgtggccacgatcgcgtttggcatgggcatcgataagccc
gatgtgcgttttgtggcccatatcgatctgcccaagagcatcgagggctattaccaggag
accgggcgcgcgggtcgcgacggcgaaccgagcgtcgcgtggctcgcctatggcctcgcc
gatgtggtgcagcagcgccggatgatcgacgagtcccccggggatatggcccatcgccgc
cgcctgtccgcgcacctcgacgcgatgcttgcgctgtgcgagaccgtggagtgccgccgc
gtgaatctgctgacctattttggtcagccctcgcagccctgcggcaactgcgatgtatgc
ctgaccccgccccaggtctgggacggcacggtgcccgcgcagaagctcatgagcacaatt
gtgcgcctgcagcgcgaacgcaaccagtccttcggcgcgggccagatcatcgatattctg
cgcggcaagaccaccccacgcaccacccagtggggccatgagaccctcgccacgtggggg
atcggccaggatctcagcgagcagcagtggcgcggtgttgtccgccagcttctcgcgcgc
ggcctgctgctgaccacgggcgaatacgggacgctggcgctctcccagaccagccccgag
gtgctctcgggcggtcgtaccgtgccgatgcgcagcgaacccgagcgctcgaaatcgcgc
ggcggcggcggtgcccggcgcgccgcgcatcccgagctggacccgcgcgatgccgggctc
tttgaggcgctgcgggcctggcgcgcggccgaggccaccgagcagggggtgcccgcctat
atcgtctttggcgatgccaccctgcgccaggtggcggccgagcggcccaccgaactctcc
gggctggacggggtcaccggtatcggtgagaaaaaactcgaaaaatacggtgcgggcctg
atcggcgttgtcaccggctatgaaggcgaatag
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