Mycetocola spongiae: KXZ72_11605
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Entry
KXZ72_11605 CDS
T08087
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mspo
Mycetocola spongiae
Pathway
mspo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KXZ72_11605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mspo03021
]
KXZ72_11605
03400 DNA repair and recombination proteins [BR:
mspo03400
]
KXZ72_11605
Enzymes [BR:
mspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KXZ72_11605
Transcription machinery [BR:
mspo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KXZ72_11605
DNA repair and recombination proteins [BR:
mspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KXZ72_11605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UCR88595
LinkDB
All DBs
Position
2531607..2532599
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTIPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKTGSGQVTAADISAPAGVEVHN
PELVIATLNDKAKFELELTIERGRGYVSSGQNRNEFSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVESKPAITPRDAIASAGTTLVELFGLARELNTAAEGIEIGPAPVD
AVLSSELSIPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LVEMGLSLKDSVPGFDGAHFYSGFEDETSN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgccccacgctcaccgaagagaacatttccgagttccgcagccgg
ttcatcattgagccgctcgagcccgggtttggttacaccctgggtaactctctgcgtcgt
accctgctgtcgtcgatccccggagccgctgttaccagcatccgcatcgacggtgtcctg
cacgagttcagcaccatccccggtgtgaaggaagatgtcaccgagatcatcctgaacatc
aagggcctggttgtctcgagcgagcacgacgagccgatcaccgcgtacctgcgcaagacc
ggttccggccaggttaccgccgccgacatctcggctccggccggtgtcgaggtacacaac
cccgagctggttatcgcgaccctgaacgataaggccaagtttgaacttgagctgaccatc
gagcgcggtcgtggctacgtttcttccggacagaaccgcaacgagttctccgaggccggt
cagattccgatcgactcgatttactccccggtcctgaaggtcacctaccgcgtcgaggca
actcgtgccggtgagcgcaccgacttcgaccgcctcgttgtggacgtcgagtccaagccc
gccatcacgccccgggatgccatcgcttcggccggcaccaccctggtcgagctgttcggc
ctggctcgcgagctcaacaccgccgccgagggcattgagatcggccccgcgccggttgac
gccgtcctctccagcgagctctcgatcccgatcgaggacctggacctgtcggtccgctcg
tataactgcctgaagcgcgagggcatcaacacggtttcggagctcgtagctctctccgag
acccagctgatgaacatccgcaacttcggacagaagtcggtggacgaggttcgcgacaag
cttgtagagatgggtctgtccctcaaggactcggtccccggtttcgacggcgcccacttc
tactcgggcttcgaagacgagaccagcaactaa
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