Mycetocola spongiae: KXZ72_12650
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Entry
KXZ72_12650 CDS
T08087
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mspo
Mycetocola spongiae
Pathway
mspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KXZ72_12650 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspo03019
]
KXZ72_12650 (groL)
03110 Chaperones and folding catalysts [BR:
mspo03110
]
KXZ72_12650 (groL)
03029 Mitochondrial biogenesis [BR:
mspo03029
]
KXZ72_12650 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mspo04147
]
KXZ72_12650 (groL)
Enzymes [BR:
mspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KXZ72_12650 (groL)
Messenger RNA biogenesis [BR:
mspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KXZ72_12650 (groL)
Chaperones and folding catalysts [BR:
mspo03110
]
Heat shock proteins
HSP60 / Chaperonin
KXZ72_12650 (groL)
Mitochondrial biogenesis [BR:
mspo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KXZ72_12650 (groL)
Exosome [BR:
mspo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KXZ72_12650 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KXZ72_12650 (groL)
Exosomal proteins of breast cancer cells
KXZ72_12650 (groL)
Exosomal proteins of colorectal cancer cells
KXZ72_12650 (groL)
Exosomal proteins of bladder cancer cells
KXZ72_12650 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
UCR88789
LinkDB
All DBs
Position
2760111..2761730
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTSVVLAQALVREGLRNVAAGADPISLKKGIE
KAVAAVSAELTSAAKEIETKEEIAATASISAADKGIGEIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSAYFVTDPDRQEAVFEEPYILIVNSKISAIKDLLPIVDQVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIS
EEVGLKLENVTLDLLGRARKVVITKDETTIVEGAGDAEAIEGRVSQIRKEIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFEKLEVSGDEATGANIVRVAIEAPLKQIALNAGLEPGVVAAKVRELPVGHGLNAAT
GEYGDMIAQGIIDPAKVTRSALQNAASIAGLFLTTEVVVADKPERNAAPAGDPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgcttttgacgaagaggcccgccgcggtcttgagcgtggactgaac
acgctggccgacgccgtcaaggtcacccttggcccgcgcggtcgcaacgtagtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtatccatcgccaaggagatcgag
ctcgacgacccgtacgagaagatcggtgcggagcttgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgaccacctcggttgtcctggcccaggccctggttcgc
gaaggcctgcgcaacgtcgcagccggagccgaccccatcagcctcaagaagggtatcgag
aaggccgtggccgccgtcagcgccgagctgaccagcgccgccaaggaaatcgagaccaag
gaagagatcgccgccacggcttcgatctccgccgccgataagggcatcggtgagatcatc
gccgaggccatcgataaggtcggtaaggagggtgtggtcaccgttgaggagtccaatacc
ttcggcaccgagcttgagctgaccgagggtatgcgctttgataagggctacctgtcggct
tattttgtcaccgaccccgaccgtcaggaggctgtttttgaagagccctatatcctgatc
gtcaactccaagatctccgcgatcaaggacctgctgcccatcgttgaccaggtcatccag
tccggcaagcagctcctcatcatcgccgaggacgttgacggagaggccctggccaccctg
gtggtcaataagatccgtggcatcttcaagtcggtagccgtgaaggcccccggcttcgga
gaccgtcgcaaggctcagctgcaggacatcgcgatcctcaccggcggccaggtcatctcg
gaagaggttggcctgaagctcgagaacgtgaccctggacctcctgggccgtgcccggaag
gttgtcatcaccaaggacgagaccaccatcgtcgagggcgccggcgatgccgaggccatc
gagggtcgcgtctcgcagatccgcaaggagatcgagaacaccgactccgattacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggtgttgcggtcatcaaggccgga
gcggccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggatgcagtgcgtaac
gccaaggctgccgtagaagagggcatcgtcgccggtggtggcgtggccctcatccaggcc
ggcaagctcgccttcgagaagctcgaggtttcgggcgacgaggctaccggtgcaaacatc
gtgcgcgtggccatcgaggccccgctcaagcagattgcactcaacgcgggcctcgagccc
ggtgttgtggccgccaaggtgcgcgagctgcccgtcggacacggcctcaacgccgccacc
ggcgagtacggcgacatgattgcccagggcatcatcgacccggccaaggtcacccgctcg
gcgctgcagaacgccgcgtcgatcgccggcttgttcctcaccaccgaggttgttgtggcc
gataagcccgagcgcaatgccgctccggccggcgaccccacgggtggtatggacttctag
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