Methylosinus sporium: MSP5_000656
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Entry
MSP5_000656 CDS
T11225
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
mspr Methylosinus sporium
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mspr03036
]
MSP5_000656
Chromosome and associated proteins [BR:
mspr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
MSP5_000656
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
HisG
Motif
Other DBs
NCBI-ProteinID:
XWX53666
LinkDB
All DBs
Position
665281..669591
Genome browser
AA seq
1436 aa
AA seq
DB search
MFKKSTPAAADAAAPILARHSSTGSVIADAARRLLPHLEHGRHVDAAIVRSAMESAFGAS
DASGAWDWKMGYDACEAATVLFLRKYGKALFRKADSPTATLPMLSKIANLLPTHTRRSEE
SETFQQFSTPIPLGLAVLAAAAISPADRVLEPSAGTGLLAVLAEMAGASLILNELAETRA
ELLSLLFPSVPVNRFDSAQIDDHLDPAITPSVVLMNPPFSAMANVSGRVADAAHRHVASA
LARLADGGRLVAITGASFAPDAPVWRDAFVRLQQRGRVVFSAVIDGAVYAKHGTSVETRL
TIIDKLPADDPTGFPASPGMAPDVATLLAWIGELAPPRLPVALPAPACGPRPRTAPAVSV
RNAPVRDRAPDGAALAYATVDWTPPEGARLTDAIYEEYGLQSIRIPGSQTHPTKLVQSAA
MASVAPPKPSYRPRLPANIASDGALSDAQLETVIYAGEAHSAFLAGSWTVDETFDVVAAA
RDDAKNGVRFRRGFMLGDGTGAGKGRQSAGIILDNWMQGRRKAVWISKSDKLLEDAQRDW
SALGMERLLVTPLSRFPQGKPISLQEGILFLTYATLRSDERGEKVSRVRQIVEWLGSDFD
GVIIFDESHAMQNAAGGKSERGDQAASQQGRAGLRLQHALPNARIVYVSATGATTVHNLA
YAQRLGLWGGEDFPFATRAEFVEAIEAGGVAAMEVLARDLRALGLYTARSLSYEGVEYEL
VEHRLTPEQTRIYDSYAEAFAVIHNNLDAAMQAANITGATGTLNRQAKAAARSAFESAKQ
RFFGHLLTSVKTPTLIRSIERDIEEGHAAVVQIVSTGEALMERRLSEIPTEEWNDVQVDI
TPREYVLDYLTHSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESREAVARRTALIEKLASL
APVPGALDQIVQRFGTDTVAEVTGRSRRIVRKGDRLAVESRAGSANLAETAAFMDDQKRI
LVFSDAGGTGRSYHAELSARNRRLRVHYLLEPGWKADTAIQGLGRTNRTNQAQPPLFRPI
ATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYARDALRKLYLLLA
RGKIEGCSLQTFEEATGLSLTDSNGIKDDLPPITTFLNRLLALTIELQGVLFTAFEQLLN
AKVEGAIAAGVYDVGLETLRAESFLVTERQTIYVHPGTGAETRLLTITQRERNHPLTLDR
AFDLLADRHAVPLVNERSGRAAIQFPAPSLMLDDGEIERRVRLIRPMEQHYASLKMMDES
NWIEADRRAFAAAWSAEVAAVPEFSDSTIHIVAGLLLPIWKRLPKDSTRVYRLQTDDGER
IIGRRVTPAWVAGALASGAVDLSAEDAFAALTDGRAVLHLADDLQLRLIRVMGAHRIELS
GFIDAMRERLSAYGLFHEIISWKLRMFVPVDASGPAVLAKLMERYPLQRVSEKEAA
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaagtctacccccgcggccgccgacgcggctgcgccgattctcgcccgccac
tcttctaccggctccgtgatcgccgacgcggctcgccgcctgcttccccatctcgaacat
ggccgacacgtcgacgccgccattgttcgctcggcgatggaatccgcctttggcgcgtcg
gacgcctccggcgcctgggactggaagatgggctatgacgcctgcgaggcggcgacagtc
cttttcctgcgcaaatacggaaaggcgcttttccgcaaagccgattctccgaccgccact
cttccgatgctgtcgaaaatcgcaaacctcttgccgacgcatacgcgcagatcggaggaa
agcgagaccttccagcaattctcgacgccgatcccgctcggcctcgcggttcttgccgca
gcggcgatttcgcccgccgaccgcgttctcgaaccctcggccggcaccggactgctcgcc
gttctcgccgagatggccggcgcatccctcattctcaacgagctcgccgagacccgcgcg
gagcttctctcccttctttttccttccgtcccggtcaaccgcttcgattcggcgcagatc
gacgatcatctcgatccggcgatcactccttccgtcgtgctgatgaatccgccgttctcg
gccatggcgaatgtctccggccgcgtggcggacgcggcccatcgtcacgtcgcttccgcg
ctggcgcgactggccgatggcggccgcctcgtcgcgatcacgggcgcgagcttcgcgccc
gacgctcccgtttggcgagacgccttcgtgcgactgcagcagcgtgggcgcgtcgtcttt
tccgccgtgatcgacggtgccgtctacgccaagcacggcacatcggtcgagacgcggctg
acgatcatcgacaagctgccggcggacgatccgaccggctttccggcatcgcccggcatg
gcgcctgatgtcgcgacgctccttgcctggatcggcgagttggcgccgccgcgcctgccg
gtcgccttgccggcgccggcctgcggtccgcggccgcgcacggcgccggctgtttccgtt
cgaaacgctccggttcgcgaccgcgcgcccgatggcgccgcgctcgcctacgcgaccgtc
gactggacgccgccggaaggcgctcgcctgacggatgcaatctatgaagaatacggattg
cagtcgatccgtattcccggttctcagacacaccccaccaagctggtgcaatcggccgcc
atggcatcggtcgcgccgccgaagccgagctatcgaccgcgattgccggcgaacatcgcc
tcggacggcgctctgtccgacgcgcagctcgaaacagtgatctatgccggagaagcgcat
tcggcgtttctcgccggctcatggacggtcgacgagaccttcgacgtcgtcgccgcggcg
cgcgacgacgccaagaacggcgttcgcttccggcgcggcttcatgctcggcgacgggacc
ggcgccggcaagggccgccagtcggctgggatcatcctcgataattggatgcagggccgc
cgcaaggcggtgtggatctccaaatccgacaagctgctcgaggacgcgcagcgcgactgg
tcggcgctcggcatggagcgcctgctcgtcacgccgctctcgcgcttcccccagggcaag
ccgatctcgctgcaggaaggtatcctatttttgacctacgctacgctgcggtccgacgag
cgcggcgagaaggtttcccgcgtgcggcagatcgtcgaatggttgggctccgatttcgac
ggggtgatcatcttcgacgagagccacgccatgcagaacgccgcaggcggcaagagcgaa
cgcggcgaccaggccgcctcgcagcagggccgcgcaggacttcgtctccagcacgctttg
ccgaacgcgcgcatcgtctatgtttcggctaccggcgccaccacggtccataatctcgcc
tacgcccagcgcctcggcctctggggcggcgaggatttccccttcgcgacacgcgccgaa
ttcgtggaggcgatcgaagccggcggcgtcgccgcgatggaggtgctcgcccgcgatctt
cgcgcgctcggcctctatacggcgcgctcgctcagctatgagggcgtcgaatatgagctg
gtcgagcatcggctgacgccggagcagacccggatctatgattcctacgccgaagccttc
gccgtcattcacaataatctcgacgccgccatgcaggcggcgaacatcaccggcgcgacc
ggcacgctcaaccggcaggccaaagccgccgcacgatcagcgttcgaatccgccaagcaa
cgattcttcggccatctgctcacgagcgtgaagacgccgacgctgatccgctcgatcgag
cgcgatattgaggaaggacacgccgccgtcgtccagatcgtctcgaccggcgaagcgctg
atggagcgacgcctctcggaaattccaaccgaggaatggaacgacgttcaggtcgacatc
acgccgcgggaatatgtgctcgactatctcactcattccttcccggtgcagctctacgag
cccttcaccgacagcgaaggcaatctgtcatcgcggccggtctttcgcgacggccagccg
gtcgagagccgcgaggcggtcgcccgccgcactgcgctcatcgaaaagctcgcgtccctg
gctccggttcccggggcgctcgaccagatcgtccagcgtttcgggaccgatacggtcgcc
gaggtgaccgggcgctcgcggcgcatcgtgcgcaagggcgaccgcctcgccgtcgaaagc
cgcgcgggctcggccaatctcgccgagaccgctgccttcatggatgatcagaagcgcatc
ctcgtcttttccgacgccggcggcaccgggcgcagctaccacgcggagctatcggctcgg
aatcgtcggctccgcgtccactatctgctcgagccgggatggaaagccgacaccgccatc
cagggcctcggtcgcaccaaccgcaccaatcaggcgcagccgccgctgtttcggccgatc
gcgaccgatgtgaaggcggagaagcgctttctctcgaccatcgcgcgccggctcgacacg
ctcggcgcgatcacgcgcgggcagcgtcagacgggcggccaaggcctgttccggcccgag
gacaatctcgaaagccattacgcgcgcgacgcgctgcggaagctctatctgctgctcgcc
cgcggcaagatcgagggctgttccttgcagaccttcgaagaggcgacgggattgtcgctg
acggattccaatgggatcaaggacgacctgccgccgattacgacctttctcaatcgacta
ctagcgctgaccatcgagctccagggcgtgctgttcacggccttcgagcaattgctgaac
gccaaggtcgaaggcgccatcgctgccggcgtctatgacgtcggactcgagacgctgcgg
gccgagagtttcctcgtcaccgaacgccaaaccatttacgtccatcccggtacaggcgcg
gagacgcgcctgctgacgatcacgcagcgcgagcgcaatcatcccctgacgctcgatcgg
gcgttcgatcttctcgccgaccggcacgctgtgccgctcgtcaacgagcgctcgggccga
gcggcgatccaattccctgcgccgtcgctgatgctcgacgatggcgagatcgagcggcgc
gtgcgcctgatccgaccgatggagcagcattatgcttctctgaagatgatggatgaaagt
aactggatcgaggccgatcggcgggctttcgccgccgcgtggagcgccgaggtcgccgcc
gttccggaattttccgacagcacgatccatatcgtcgccggcctgctgctaccgatctgg
aaacgactgccgaaggattcgacgcgggtctatcgcctccagaccgacgacggcgaacgc
atcatcggccgccgagtcacgcccgcctgggtcgcgggagccctcgcgagcggcgcagtc
gatttatccgcagaggacgctttcgccgccctgacggatggccgcgccgtcctccacctc
gccgatgacctccagcttcgccttatccgcgtcatgggcgcgcaccgcatcgagctgtcg
ggattcatcgacgcgatgcgcgagcgtctctccgcctatgggctgttccacgagatcatc
tcctggaagctgcgcatgttcgtgcctgtcgacgcgagcggcccggccgtgctggcgaaa
ctgatggagcgctatccgctccagcgcgtcagcgaaaaagaggccgcgtga
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