Methylosinus sporium: MSP5_000841
Help
Entry
MSP5_000841 CDS
T11225
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mspr Methylosinus sporium
Pathway
mspr03410
Base excision repair
mspr03430
Mismatch repair
mspr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSP5_000841 (recJ)
03430 Mismatch repair
MSP5_000841 (recJ)
03440 Homologous recombination
MSP5_000841 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mspr03400
]
MSP5_000841 (recJ)
DNA repair and recombination proteins [BR:
mspr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSP5_000841 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSP5_000841 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSP5_000841 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XWX53838
LinkDB
All DBs
Position
855281..857101
Genome browser
AA seq
606 aa
AA seq
DB search
MLDKIAGNDRPPFLGVERSVSGRVWRARLRPQEEVQASAIAQLHGHGDLLSRVLAGRGIT
QETAATFLAPTLRELMPDPLVLQEMDAAVERLARAVEASEQIALFGDYDVDGAASSALFA
EFLEAAGCPRPFLHIPDRILEGYGPNVEAIADLRARGANLLVTLDCGTTSHAALASARAS
GLDVIVVDHHQAPELLPEAIVVNPNRADDLSGLGHLCAAGVAFMTLAALARELRRRGHWT
DARPQPDLLAGLDLVALATIADVARLHGLNRAFVAKGLAVMRGRARIGLSALLDAARVDG
PPRAYHLGFVLGPRINAGGRIGDAALGARLLTLRDPIEAARIAAELDRLNVERQALEKAT
LEEAEAEADRQMMRSNRLSCLVVAGEGWHPGIVGIVASRLKDKFKIPAFVIAKTGEVCSG
SGRGSSGVDLGRTVRMAVDEGLLQKGGGHAMAAGVTLARDRIDSFRAFMNDALDDDVARA
RDADALLVDGALTARGASVDFIRGLERAGPFGAGNPEPLFVFPDQRIVDSAVVGSSHVRA
RLQSGDGARLDAIAFRAVGTPIGDALLDGRGRLLHVAARLGANVFRGSERVETRIADLAR
PDRETW
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaaaatcgccggaaacgaccggccgcccttcctcggcgtcgagcgctccgtt
tcggggcgcgtctggcgcgcgcggctgcggccgcaggaggaggtccaggcgagcgccatc
gcgcaactccacggccatggcgatcttctctcccgcgtgctggccgggcgggggatcacc
caggagacagcggcgacctttctcgcccccacattgcgcgaactaatgcccgatccgctc
gtcctgcaggaaatggatgcggcggtcgagcggctcgcccgcgccgtcgaggcgagcgag
cagatcgccctgttcggcgactatgacgtcgacggcgcggcatcttcggccctcttcgcc
gaatttctggaggcggccggctgcccgcgacccttcctgcacattcccgaccgcattctg
gaaggctacggccccaacgtcgaagcgatcgccgatctacgggcgaggggggcgaacctt
ctggtgacgctcgactgcggcacgacgagccacgccgccctcgcctcggcccgcgcgtcg
ggtctcgacgtcatcgtcgtcgaccatcatcaggcgcccgagctgcttcccgaggcgatc
gtcgtcaaccccaaccgcgccgacgacctctccggtctcggccatctctgcgcggccggg
gtcgccttcatgacgttggcggcgctggcccgcgagctacgccggcgcggacattggacc
gacgcccggccgcagcccgatctcctcgcggggctcgatctcgtggccctggccacgatc
gcagacgtcgcgcggctgcacggcctcaaccgcgcctttgtggcgaagggcctcgcggtc
atgcggggccgcgcgcgcatcggcctttcggcgctgctggacgccgcccgggtggacggg
ccgccgcgcgcctatcatctcggcttcgttctgggccctcgcataaacgccggcggacgc
atcggcgacgcggcgctgggggcgcggctgctgacgctgcgcgatcccatcgaggcggct
cgcatcgccgccgagctcgaccggctgaatgtcgagcggcaggcgctggagaaggccact
ctggaagaggcggaggccgaggcggatcgacaaatgatgcgctccaaccgtctctcctgc
ctcgtggtcgcgggcgagggatggcatccgggcattgtcggaatcgtcgcctcgcggctc
aaggacaagttcaagattcccgcctttgtcattgcgaagacaggggaagtctgctcaggc
tcaggcagaggctcgagcggcgtcgatctcggccgcacggtgcgtatggccgtcgacgag
ggccttttgcaaaagggcggcggccatgcgatggcggccggcgtcacgctggcgcgcgat
cgaatcgactccttccgcgcctttatgaacgacgcgctcgatgatgacgtcgcgcgcgcg
cgcgacgccgatgcgctgctcgtcgacggcgcgctgacggcgcgcggcgcgagcgtcgat
ttcatccgcgggctcgagcgggcggggcccttcggcgccggcaatcccgagccgctcttc
gtttttcccgaccagcgcatcgtcgattcggcggtggtcggctcctcccatgtgcgggcg
cggctgcaatcgggcgacggggcgcggctcgacgccatcgcctttcgcgccgtgggaacg
ccgatcggcgacgctctgctcgacggacgcggtcggcttctgcatgtcgccgcccgactc
ggagccaatgtgtttcgcggctccgagcgcgtggagacgcggatagccgatctcgcccgg
ccggatcgcgaaacatggtga
DBGET
integrated database retrieval system
